Shewanella decolorationis: D0436_09840
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Entry
D0436_09840 CDS
T09167
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00300
Lysine biosynthesis
sdeo01100
Metabolic pathways
sdeo01120
Microbial metabolism in diverse environments
sdeo01230
Biosynthesis of amino acids
Module
sdeo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D0436_09840 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdeo01002
]
D0436_09840 (dapE)
Enzymes [BR:
sdeo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
D0436_09840 (dapE)
Peptidases and inhibitors [BR:
sdeo01002
]
Metallo peptidases
Family M20
D0436_09840 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QDZ90740
UniProt:
A0A5B8QVK8
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All DBs
Position
2708341..2709486
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AA seq
381 aa
AA seq
DB search
MTHASKTGPVTELTKELIARPSVTPLDEGCQTLMAERLAAIGFNIEPMVFEDTTNMWARR
GNAGPVFCFAGHTDVVPAGDLSRWHTPPFEPTIIDGYLYGRGAADMKGSLAAMIVATERF
VAKHPNHPGSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWALVGEPSSTLKLGDVVK
NGRRGSLTANLTVKGIQGHVAYPHLADNPIHKAAPFLAELSQTHWDNGNEFFPPTSMQIA
NINGGTGASNVIPGTLEVMFNFRYSTEVTAEILIERVEALLTSHELDYDLSWTFNGLPFL
TGEGPLLDATRHAIRQVTGYDTDPQTTGGTSDGRFIAPTGAKVLELGPVNATIHKVNECV
KVDDLEQLALCYEVILEQLLC
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgcttcgaaaactgggccggttaccgaactgactaaagagttaatcgcccgt
ccctcggtcacaccgctggatgaaggctgccaaactctgatggccgaacgtcttgccgcc
attggctttaatattgagcccatggtctttgaagacaccaccaatatgtgggcgcgtcgc
ggtaatgcaggccccgtattttgttttgccggccataccgatgtagtgcccgcgggcgat
ttaagccgctggcatacccctccctttgaaccaaccattatcgacggttatctttatggt
cgcggcgccgccgacatgaaaggctcgctggcggcgatgatcgttgcgaccgaacgtttt
gtggctaagcacccaaatcatcccggctcgattgcgtttttgatcaccagcgatgaagaa
ggcccctttatcaatggcaccacacgggttatcgacaccctagaagcccgcaatgaaaaa
atcacttgggcgctagtgggcgaaccctcatcgaccctaaaactcggtgatgtagtcaaa
aatggtcgccgtggcagcctgaccgccaacttaaccgttaagggcattcagggccatgtg
gcctatccgcaccttgcggataacccaattcacaaagccgcaccatttttagccgagtta
agccaaacccattgggataatggcaacgaattcttcccgcccaccagcatgcaaatcgcc
aatattaatggcggcacgggcgcatcgaacgtgatcccaggcaccctagaggtcatgttt
aacttccgttattcgaccgaagtgaccgccgagatattaatcgagcgtgtggaagcctta
ttgacctcccacgaactggattatgacctcagctggaccttcaacggcctgccattttta
actggcgaaggcccattgttagacgcgacccgccatgcgattcgtcaagtcactggttat
gatacggatccgcaaaccaccggcggcacctctgacggacgctttattgcaccaacgggc
gccaaagtgttggaactcggcccagtgaacgccactatccataaagtgaatgaatgcgta
aaggtcgatgatctggagcagttagccctgtgctacgaagtgattttggaacagttactg
tgttaa
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