Shewanella decolorationis: D0436_10145
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Entry
D0436_10145 CDS
T09167
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdeo03032
]
D0436_10145 (gyrA)
03400 DNA repair and recombination proteins [BR:
sdeo03400
]
D0436_10145 (gyrA)
Enzymes [BR:
sdeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
D0436_10145 (gyrA)
DNA replication proteins [BR:
sdeo03032
]
Prokaryotic type
DNA Topoisomerases
D0436_10145 (gyrA)
DNA repair and recombination proteins [BR:
sdeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D0436_10145 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PUA_4
Motif
Other DBs
NCBI-ProteinID:
QDZ93216
UniProt:
A0A5B8R5L2
LinkDB
All DBs
Position
complement(2626499..2629255)
Genome browser
AA seq
918 aa
AA seq
DB search
MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM
RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT
NIPPHNLTEVVKGCLALIADPALSIEQLMEHIPGPDFPTAAIINGRKGIIDAYKTGRGRA
VMRALAEVETEDNGRERIIVTEIPYQVNKAKLIEKIAELVKDKKIEGISGLRDESDKDGM
RIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRREV
VTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWALGHVQ
GMLEKAGDDAARPEWLEPEFGIRDGLYYLTEQQAQAILELRLHRLTGLEHDKIIAEYEEL
LEFIAGLLFILRSPERLMEVIKEELEEILAEYGDARRTVINANEIDMSLEDLINEEDVVV
TLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMYW
LKVYQLPLASRTSRGRPIVNLLPLADGERITAILPVREYAEDKYIIMATSNGTVKKTALT
AYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFKEGEEVAVLDENGNP
VLDEEGNPQINFKGVRPMGRGATGVRGIKLEEGQKVVSLIVPKGDGAILTVTENGYGKRT
ELSEYPSKSRATKGVVSIKVSERNGAVVGAVQVGGNDEIMLISDKGTLVRTPANGVSIIG
RNTQGVTIIRTASDEKVVGLQRIDEIQGDEDEVELDENGMPIVPVVAEGDSVQEEPLEDE
LEEELDEDEELDDEQDED
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggcatcatctatttcgccaattaatatcgaagacgaactaaagaattcg
taccttgattacgccatgagcgtcatcgtgggacgtgcattaccagacgtgcgtgatggc
cttaagcctgtgcatcgccgcgtgctgtttgccatgagtgaattaaagaacgattggaac
aagccgtacaaaaagtctgcccgtgtggttggtgacgtgatcggtaaatatcacccccat
ggtgattcggcggtttacgatactattgtacgtatggctcagcctttctctctgcgttac
accttagtcgacggtcaaggaaacttcggttcggttgacggtgactccgcagcggcaatg
cgttataccgaaatccgtatggacaagttagcgcaccagctcctcgccgatcttgaaaaa
gaaaccgttgactatgtgcccaactacgatggcacagaacaaattcctgctgtattaccg
acacgcgtccctaacctgttaattaacggttcatcgggtattgcggtaggtatggcgact
aacattccgcctcacaacttgaccgaagtcgttaagggctgtttagcgctaattgccgat
cctgcgctgtctatcgaacagttgatggaacatattcctggcccagacttcccaacggcg
gcgattatcaacggccgtaaaggcattatcgatgcatataagacgggccgcggtcgtgca
gtaatgcgcgcactggctgaagtcgaaaccgaagataatggccgtgaacgtattatcgtc
accgaaattccttatcaggtgaacaaggcgaaactcatcgagaaaatcgctgagttagtg
aaagataagaagattgaaggcatcagcggcctgcgcgacgagtctgacaaagacggtatg
cgtatcgttattgaaatcaaacgcggcgaagtgggtgaagttgtcctgaacaacctctat
gcccagacacaaatgcaatgttcttttggtatcaacatggtggccttgaccaatggtcag
cctaagttgttcaacttaaaagaaatgctcgagtgctttatcctgcaccgccgtgaagtg
gtgactcgccgtaccgtattcgaactgcgtaaagcgcgcgagcgcgcccatattcttgag
gcattagcggtcgcgcttgctaacatcgacccgattattgcgctgatcaaagcctcgcca
accccagcagacgcgaaagttaaactggttgagcagggctgggcactgggtcatgtgcag
ggcatgcttgaaaaagcaggtgacgatgcagcgcgtcctgaatggttagagccagaattc
ggtatccgtgatggcttatattacctgactgagcaacaggctcaggcaattctagagctg
cgtttacaccgtttaaccggtcttgagcacgataagatcatcgccgaatacgaagagctg
ctcgagttcatcgcgggtctgctgtttattctgcgcagccctgagcgtttgatggaagtg
atcaaagaagagctagaagaaattcttgctgaatacggtgatgctcgccgcactgtcatc
aacgccaatgaaattgatatgagtcttgaagacttaatcaacgaagaagacgtggttgtg
accctgtcacacttaggttacgccaagtaccaaccgctgagcgattaccaagcccagcgc
cgtggtggtaaaggtaaagccgcaactaaagtgaaagacgaagatttcgttgaaaaactg
ctggttgcgaatacccacgacaccattctgtgcttctcagatttcggtaagatgtactgg
ctcaaggtctatcaattaccgctggcgagccgcacatcgcgcggtcgtccgattgttaac
ttgctgccgctggccgatggtgagcgcattacggcgattctgccggtgcgtgaatacgct
gaagataagtacattattatggcgacctctaacggtaccgtgaagaagactgcgctaacg
gcctacagtaacccacgtgcaaacggtattattgccgttaacctgaaagacggtgaccaa
ctgattggtgtcgatatcaccaacggtgatgatgagatcatgttgttctccaatgaaggt
aaagtggttcgctttaaagaaggcgaagaagtggccgtactcgatgaaaacggcaaccca
gtgttagacgaagaaggcaacccacaaatcaacttcaagggcgtgcgtccaatgggtcgc
ggcgcgaccggtgttcgcggtatcaagctcgaagaaggtcaaaaagtagtgtctctcatc
gtacctaagggcgatggcgctatcttaaccgtgaccgaaaacggctatggtaaacgtact
gaactgtctgaatacccatcgaagagccgcgcgaccaaaggtgtggtatcgatcaaggtg
agcgagcgtaacggtgcggtggttggcgcggtacaagttggcggtaatgatgaaatcatg
ctgattagcgataaaggtaccttagtccgtacgcctgcgaatggtgtgtctatcatcggt
cgtaacacccaaggtgtgactattatccgtaccgcaagtgacgagaaagtggttggtctg
caacgtatcgatgagatccaaggcgacgaagatgaagtcgaattggatgaaaacggtatg
ccaatcgtcccagttgtcgctgaaggtgactctgttcaagaagagcctttagaggatgaa
ctggaagaagaattagacgaagacgaagagcttgacgacgagcaagacgaagactaa
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