Shewanella decolorationis: D0436_10425
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Entry
D0436_10425 CDS
T09167
Name
(GenBank) site-specific integrase
KO
K14059
integrase
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
D0436_10425
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm-DNA-bind_2
Phage_integrase
Phage_int_SAM_3
Phage_int_M
DTP-pb9_A-dom_N
Int_N
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
QDZ90850
UniProt:
A0A5B8QVW2
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Position
complement(2501452..2502666)
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AA seq
404 aa
AA seq
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MASIRSRNQKLFFDFYYQGIRCREQTSLNDTKLNRSRLEGVLRKIEAQIRLDRFIYSDIF
PDSKRCEDFKKYDEQIKLVKDSEPEPSEQLLLDIPTFSQFADEWLAENKVQWKVSHSKNV
FMIFERYLIPSFGTYAMDQITRPQIIKYRASIIEPKRKTKHSKKLSNDWINHVMTPLRGI
LNEAALRFDFPTPFINIKPLKIDKTAIEPFSLAEVQLFLSRVREDFRDYYTVRFFTAMRT
AEIDGLKWQFVNLDRNEILIQETLVDGNVETPKTSASYRSIQLSQPVVEALKRQRKVTGS
KTYVFCNASGNPLDHRNVTKRVWYPALDEMHLKRRRPYQTRHTCATLWLAAGENPEWIAK
QMGHSTTKMLFEVYSRYVPNATRQDGSAFDRLIEHVNFDAIQEN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctagtatcagatcccgtaaccaaaaacttttttttgatttttactatcaaggtatt
cgatgtcgtgaacagacgtcattaaatgataccaagctcaaccgtagtcggttagaaggt
gtgttacgtaaaattgaagcgcaaatccgattggatcgatttatatactctgacatcttt
cctgatagtaaacgttgtgaggattttaaaaaatatgatgaacaaattaagttagtcaaa
gatagtgaaccagaaccgtcagagcagttactgttagacattcctacttttagtcaattt
gctgacgaatggctcgccgaaaataaagttcaatggaaggtaagtcacagtaaaaatgta
tttatgatatttgagcgttatttaataccttcatttgggacatatgccatggaccaaatt
accagacctcaaattatcaagtaccgtgcgagtattattgaacctaagcggaaaacgaaa
cattcaaagaagctcagtaacgactggataaaccatgtgatgacgccgctacgtgggatc
ctaaatgaagcggctttgcggttcgacttccctactccgtttatcaatatcaaaccgtta
aaaattgataagacagccattgaaccattttcactggcagaagttcagcttttcttgtcg
agagtgcgtgaagattttcgcgactattatacagtgagatttttcactgctatgaggact
gctgaaattgatgggcttaaatggcagtttgttaatttggaccgcaacgaaattttgatc
caagagacgcttgttgacggcaatgtagagacacctaaaacatcagcatcatatagaagc
atacaattgtcacaacctgtcgttgaagcactaaaacgacaacgaaaagtgacagggagt
aagacttatgtattttgcaatgcaagtggcaatcctcttgatcatcgcaatgtgacaaaa
cgtgtttggtatccagcattagatgagatgcacctaaaaagaaggcgaccttatcaaaca
agacatacatgtgcgacgttatggctagccgccggtgaaaacccagaatggatcgccaag
caaatggggcacagcacgacgaaaatgttatttgaagtctatagccgttatgtacccaat
gcgaccagacaagatggtagtgcattcgaccgactcattgaacacgttaattttgatgct
attcaggagaattaa
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