Shewanella decolorationis: D0436_11365
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Entry
D0436_11365 CDS
T09167
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D0436_11365 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdeo01007
]
D0436_11365 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeo03016
]
D0436_11365 (pheT)
Enzymes [BR:
sdeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
D0436_11365 (pheT)
Amino acid related enzymes [BR:
sdeo01007
]
Aminoacyl-tRNA synthetase
Class II (U)
D0436_11365 (pheT)
Transfer RNA biogenesis [BR:
sdeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
D0436_11365 (pheT)
Prokaryotic type
D0436_11365 (pheT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
HTH_MCM7
Motif
Other DBs
NCBI-ProteinID:
QDZ91016
UniProt:
A0A5B8QYF2
LinkDB
All DBs
Position
complement(2838297..2840684)
Genome browser
AA seq
795 aa
AA seq
DB search
MKFSESWLREWVNPAVSREALSHQITMAGLEVDGVDAVAAEFSGVVIGEVVECGQHPDAD
KLRVTKVSVGSGELIDIVCGAPNCRQGLRVAVAMVGAVLPGDFKIKKAKLRGMPSEGMLC
SYSELGIDIDSDGIIELPLDAPLGTDLREYLQLDDAVIEVDLTANRADCLGMVGLAREVG
VLNRAAVTESQWQAVTPTIDAKVAINVKETAACPRYLGRVVKNVNVKAATPLWMQEKLRR
SGIRSIDPIVDITNFVLVEFGQPMHAFDLAKLTGDIQVRLGNGEEKITLLDGSEVTIPSD
TLVIADDARPLALAGVFGGEYSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHTDSSHRF
ERGVDPEMQHKVMDRATRLVLDICGGEAGPVVEAKSDADLPKPAQILLRRSKLDKILGHH
VPDSDVVEILERLGFGVVAGEGSWQVTTATYRFDMAIEEDLIEEVARIYGYNNIPNVAPV
ASLRMSDHKETDLSLKRVRSLLVARGFQEAVTYSFVDPKLQNLVHPGEQAMVLPNPISSE
MSAMRLSMFTGLLTAVGYNQSRQQGRVRLFETGLRFVPDINAESGVRQQAMLGCVITGLQ
NDEHWAMESKTVDFFDLKGDLEAIIGLTVSASEFSFRVATHSALHPGQCAEILRNDRVIG
HIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQAVSKFPANRRDIAVVVDESVSA
GDVMKLIRKVGENQLVGINLFDVYLGKGVEPGKKSLAIALTLQDTTRTLEEKEIAETVES
VVSALKTEFNASLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagcgaatcttggcttcgtgagtgggtcaatcccgccgttagccgtgaagca
ttatcccaccagatcactatggctggtcttgaagtcgatggcgtagatgccgtggctgcc
gagttcagcggcgttgtgattggtgaagtagtcgaatgtggccaacacccagatgcagac
aaactgcgtgtgactaaagtcagtgtcggcagtggtgaacttatcgatatcgtctgtggc
gcacctaactgccgccagggcctgcgtgttgccgttgccatggtcggggctgtattgcca
ggcgattttaaaattaaaaaggctaagctgcgtggtatgccttcagaaggcatgctgtgt
tcatacagcgagctgggcatcgacatcgacagcgatggcattatcgaactgccattagat
gcgccattaggcacagatttacgtgagtatctccagcttgatgacgctgtgattgaagtg
gatttaaccgctaaccgtgccgactgtttaggcatggtgggtctggcccgtgaagtcggc
gtgttaaaccgtgctgctgtgactgagtcacaatggcaagccgttacgccaacgattgat
gccaaagtggcaatcaatgtgaaggaaaccgcagcgtgccctcgctacttaggtcgtgtg
gtgaagaacgtgaacgtgaaagcggctacgccattatggatgcaggaaaaactgcgccgc
agcggtatccgttctatcgaccctatcgtcgatatcactaacttcgtgttagttgaattc
ggccaacctatgcacgccttcgaccttgccaaactgactggcgatatccaagtgcgttta
ggcaatggcgaagagaaaatcactctgctcgatggcagcgaagtgaccattccaagcgat
accctagtgattgccgacgatgcccgcccattagcgcttgctggcgtatttggtggcgaa
tattcaggtgtgagtgacaccacgcaggacattctgctggaatgtgccttcttcgcaccg
ttagcgattatgggtaaatcacgccgtttaggtctgcataccgattcttcacaccgtttc
gaacgtggtgttgaccctgagatgcagcacaaggttatggaccgtgcgactcgcttagtg
ctggatatttgcggcggtgaagcgggccctgtggttgaagccaaatctgacgctgactta
ccaaagcctgcgcaaatcctattgcgtcgcagcaagttagataaaattctaggtcaccat
gttcccgatagcgacgtggttgaaatccttgaacgtttaggtttcggcgtggtagccggc
gagggtagctggcaggtcacgaccgccacttaccgcttcgatatggcgattgaagaagac
ttaatcgaagaagtggctcgtatctacggttacaacaacattccaaacgttgcgcccgtg
gcgtcactacggatgtcagatcataaagaaaccgatttaagcctcaagcgcgtacgttcg
ctattagtggcccgtggtttccaagaagccgtgacttacagtttcgtcgatcctaagctg
caaaatctggttcatcctggtgagcaagccatggtgttaccgaaccccatttccagcgaa
atgtcggccatgcgtttgtctatgttcacaggattattgactgcggttggctacaaccaa
agccgtcaacagggtcgtgtgagactttttgaaactggcctgcgctttgttcctgatatt
aatgcagaatcaggtgtaagacagcaagcaatgctcggttgcgtcattacagggcttcaa
aatgacgaacattgggctatggaatcgaaaactgttgattttttcgaccttaaaggtgat
ttagaagcaattatcggcttgacagtttccgcatcagaatttagctttagagtagcgacg
cattctgctcttcatccagggcaatgtgctgaaatattgagaaatgatcgagtgatcggt
catataggtgctatccatcctagtttggagaagccttttggactcaatggtaaaaccatc
gtttttgagttggaattggatgctttattgcataccagtttaccgctagcccaagctgta
tctaagttcccggctaatcgtcgtgacatcgcagtagtcgtagatgagagtgtatctgca
ggcgatgtaatgaaattgataagaaaagttggcgaaaatcagttggttggcataaacttg
ttcgatgtatacttaggtaaaggtgttgagcccggcaagaagagcttggcgatagcactt
acattacaagacactactcgtacacttgaggaaaaagagatcgctgagacagtagaatca
gttgtttctgccctgaagaccgagttcaacgcatcgttgagggattaa
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