Shewanella decolorationis: D0436_12295
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Entry
D0436_12295 CDS
T09167
Name
(GenBank) toprim domain-containing protein
KO
K06919
putative DNA primase/helicase
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
D0436_12295
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
D5_N
Toprim_2
DUF5906
Toprim_4
Zn_ribbon_DnaG
DNAG_N
Toprim_3
Pox_D5
Toprim
Motif
Other DBs
NCBI-ProteinID:
QDZ91183
UniProt:
A0A5B8QX09
LinkDB
All DBs
Position
complement(2321630..2324356)
Genome browser
AA seq
908 aa
AA seq
DB search
MTTSYVSTNSTFDHSTLDEIGLEGVRSMYDLPEIVALLLENSIKPTQSNYCQLEDDICPL
CGHKGCFKIYHGDPDRQNYHCFSCGERGDIFDFIVKMKLAKNPYDAANKLLRGELEGVTV
ITSPKPKMIMPETLELTSEQFDRRQALYLAAWEYYVEPMFEDRSTPLQSLMDKRKLSQNI
LIEYDVGYSRGALWRYLIEHEFTLEEMYASGLVKESPQSPHDFFPKGVYIFPHYDETGAI
CRFTFKDPEKKVAYQLSKLFWLNNIQFYGQHTMNRQGTVAVVEGEFDLLALMDHGWQGPV
IATNGQISQAQLAWIKENLHDRNVVTFFDSDTAGDKYREKLVQLGLPALVQVTLPEGQGK
DIDDYLRQDNALSIEVLVEQYGVVAPQASIETTSEPMQEPMQDESLASHQQTDESEQLNS
SYYDVFDEDTLNDVGNADRLAAYADGTLVYVPEHSSMYVFDEQCWRPVGDKELALARCIG
EGIIAQANRMLEDPATLKDKTKRQQADKLLAFGRQSLNRKKLADMLEIFKSSNLISAKAF
DADKMLMGINNGVLDLAIGKLLAANKEMYISRYSDINYKPDVNCPRWLQFIDEITCGDVE
YAKFLQRMVGYILTGRTDEQVLFFLYGHGCNGKSTFMNIIQRLMGSYYHQISSDVLLQSN
NSGKGPNPSLAKLNGSRLVVANELPEGSRMDENLVKSMTGSDVIVARQLYAKVELEYIPM
FKLIMVGNHKPVIRDTSPGMWRRMILLPFNASFSQQQMDPQLMDKLYAELSGILNWALEG
VQMWLKDGIKASIPNSIKSGIAEYRHESDLLAMFLEECTSKGDFVYTDELYDAFRKWAER
DGDWKMTRNIMTKRLVEKGFEKGRHNSKAMIKGIKLKSAFDDIPEQIPQASMGMRHATPT
NPNSEYSV
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgacaacctcttatgtttctactaacagcacttttgatcattcgaccttagacgaaatc
ggccttgagggcgttagatcaatgtatgatttgcccgaaattgtcgcattactgcttgaa
aactcaattaagccaactcaaagcaattattgccagcttgaggatgatatatgtccactc
tgtgggcataaaggttgcttcaaaatttatcatggtgatccagatagacagaattatcac
tgcttttcttgtggtgagaggggagatatatttgatttcattgtgaaaatgaaattagca
aaaaatccttatgatgcagcaaacaagttacttcggggagaacttgaaggagtaactgtt
ataacctcaccaaaacccaaaatgataatgccagaaacactagagttaacgtctgagcaa
tttgatcgccgtcaagcactgtaccttgccgcttgggagtattatgttgagccaatgttt
gaagataggagtacaccactccagtcacttatggataagcggaaactaagccaaaacata
ctgattgaatatgatgtaggttactctcgcggggctctttggcgttatttaattgagcat
gaattcacgcttgaggaaatgtacgcatcagggctcgttaaggaaagtccacaatctccg
catgatttctttcctaaaggcgtctatatcttccctcattatgatgaaacgggagcgatt
tgccgcttcacctttaaagaccctgagaaaaaagtagcttaccagctctcgaagctattt
tggctgaacaatatccagttttatggacagcatacgatgaatcgccaaggtacagttgct
gttgttgagggtgaatttgacttacttgctcttatggatcatggatggcaaggtccggta
atcgcaacaaacggacaaattagccaagcacaattggcgtggattaaggaaaatctacat
gacagaaatgtagtgaccttcttcgacagtgacactgcgggtgataagtatcgggagaag
ctcgttcaactgggtttacctgcacttgtccaagtcaccttaccagaaggtcaaggtaag
gatattgatgattatttgcggcaagacaacgccctttctattgaggtattggtagaacaa
tacggtgttgtagccccacaagcgtcgatagagacaacttcagaaccgatgcaagaaccg
atgcaagatgaaagccttgctagccaccagcaaactgacgagtcagagcagctcaattca
tcctattatgatgtatttgatgaagatacgctaaatgacgttggtaacgcagataggctg
gcagcatatgcagatggtacgttagtttatgtgccagaacacagcagtatgtacgtgttt
gatgagcagtgttggaggcctgtaggtgataaagaattggcactagctcgatgtattgga
gagggaattattgctcaagcgaatcgtatgctagaagatcccgcgacgcttaaggacaaa
acgaagcggcaacaagcagataagttattagcgtttggtagacagtcactcaatcgcaaa
aaacttgccgatatgttggagattttcaagtctagcaacttgatttcggcaaaagccttc
gatgcagacaaaatgctaatggggattaacaacggtgtgctcgacctcgcaatcggaaaa
ctgcttgcagcaaataaggagatgtatatcagccgttatagtgatatcaactacaagcct
gatgtcaattgcccacgttggcttcagtttatcgatgagatcacctgtggcgatgtcgaa
tacgctaagtttttgcagcgaatggtaggctatatcctaaccggacggactgatgagcaa
gttttattcttcctctatggtcatggctgtaatggtaagagtacctttatgaatatcatt
cagcggttaatgggaagctattaccatcagataagcagcgatgtcttactgcaatcaaat
aacagtggtaaaggccctaacccatccctagccaagctaaatggtagccgtctagtggtt
gccaatgagttacccgagggctctcggatggatgagaacttagtaaagtcgatgacaggt
agtgatgtgattgttgcccgtcagttgtatgccaaggtagagcttgagtatatccccatg
tttaagctcatcatggtcggcaaccataagcccgtcattcgcgataccagccccggcatg
tggcgacggatgattttactgccctttaacgccagcttcagtcagcagcaaatggacccg
caattaatggataagttgtatgcggagctatcaggtatcctcaattgggcacttgaaggt
gttcagatgtggctaaaggatggcattaaggcatctatccctaactcaattaagtctggt
attgcggaatatcgccatgagtcagacttacttgcgatgttcttagaggaatgtacgagc
aaaggtgattttgtgtataccgatgagctttacgatgcctttaggaagtgggcagaacgg
gatggcgactggaaaatgacccgtaatatcatgaccaaacggctggtggagaaaggcttt
gagaaaggccgtcacaatagcaaagccatgattaaggggattaagttgaagtctgcgttt
gatgatatcccagagcaaataccacaagctagcatggggatgaggcatgccacacctaca
aacccaaactccgagtatagcgtttag
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