Shewanella decolorationis: D0436_12570
Help
Entry
D0436_12570 CDS
T09167
Name
(GenBank) IS3 family transposase
KO
K07497
putative transposase
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
D0436_12570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_Tnp_1
HTH_21
rve_2
HTH_23
rve_3
HTH_28
HTH_Tnp_ISL3
Terminase_5
HTH_29
HTH_Tnp_1_2
DDE_Tnp_IS240
Motif
Other DBs
NCBI-ProteinID:
QDZ91231
UniProt:
A0A5B8QZ98
LinkDB
All DBs
Position
join(248464..248701,248701..249620)
Genome browser
AA seq
385 aa
AA seq
DB search
MNHKRYPEEFKIEAVKQVTVAGHSVADVAQRLGTTTHSLYAWIKRYGPDSEEHLQKSEES
AEIRRLQKELKRVTEERDLFKKSRGVLRKPPRVRYAFIQEHHHSHSVRQLCQLFDVHPSG
YYAWRLSPKSKRQKDNERLTGQLKQSWLESGGVYGYRKIHRDMRDIGEQCGINRVHRLMQ
RAGLRAQVGYRKPRARGGEQHVVTPNRLERQFNPSAPNMAWVTDITYIKTHEGWLYLGAV
MDLFSRRIIGWSMGSRITKELALDALLMAVWRRKPTGKVLVHSDQGSQYTSHDWSEFLTA
HGLEGSMSRRGNCHDNAVAESFFQLLKRERIKRKIYSTREAAKSDIFNYIEMFYNPKRQH
SSNHGLSPLEYERQYFNEAQSCLVK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacaaacgttatcccgaagaatttaaaatcgaagctgttaagcaagttaccgtt
gctggccattctgttgctgatgttgctcagcgtttaggaacaaccacccacagtctttat
gcctggattaaacgctacggccccgattcagaagaacatttgcaaaagtctgaagagtca
gccgagattcgacggctacagaaagagctcaagcgtgtcactgaagaacgtgacttgttt
aaaaaaagccgcggcgtacttcgcaagccaccccgagtaagatacgcctttattcaagag
catcaccacagccattcagtgcgacaactttgtcagctgtttgatgttcatccgagcggg
tattacgcatggagactcagccctaaatcaaagcggcagaaggataatgaacggcttaca
gggcagcttaagcagagttggctcgaatctggtggagtttatggatatcgtaaaatccac
cgtgatatgcgggatattggcgagcaatgcgggattaatcgagtacatcggctcatgcaa
cgagcaggactcagagcgcaggttggatatcgaaaacctcgtgctcgtggcggagaacag
catgtagtgacgccaaatcgtttagagcggcaatttaatccatcggcccccaatatggct
tgggtaaccgatattacctacatcaaaacacatgaaggttggttatatcttggtgcagtg
atggacttattttctcgtcgtattattggttggtcgatgggcagcagaataaccaaagaa
ctggcattagacgcgcttttaatggccgtatggcgccgtaagcccacaggtaaagtgtta
gtccattcagatcagggaagccaatatactagccatgactggagtgaatttcttactgca
catggattggaaggcagcatgagtcgacgtggtaattgtcatgataatgctgtggcagag
agcttctttcagctgttaaagcgtgagcggatcaaacggaagatctattcgacaagagaa
gcggctaaaagtgatatttttaattatattgagatgttttataaccctaaacggcagcat
agttccaatcatggcttatcaccgttagagtatgaacgtcagtattttaatgaagctcaa
agttgtctagtgaaatag
DBGET
integrated database retrieval system
