Shewanella decolorationis: D0436_12590
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Entry
D0436_12590 CDS
T09167
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo03030
DNA replication
sdeo03430
Mismatch repair
sdeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0436_12590 (dnaQ)
03430 Mismatch repair
D0436_12590 (dnaQ)
03440 Homologous recombination
D0436_12590 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdeo03032
]
D0436_12590 (dnaQ)
03400 DNA repair and recombination proteins [BR:
sdeo03400
]
D0436_12590 (dnaQ)
Enzymes [BR:
sdeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0436_12590 (dnaQ)
DNA replication proteins [BR:
sdeo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D0436_12590 (dnaQ)
DNA repair and recombination proteins [BR:
sdeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D0436_12590 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QDZ93240
UniProt:
A0A5B8R2Y7
LinkDB
All DBs
Position
2250510..2251238
Genome browser
AA seq
242 aa
AA seq
DB search
MNIISNASRQVILDTETTGMNQGSGAVYLGHRIIEIGCVEVINRRLTGRYFHQYINPGQA
IDPEAIAVHGITDERVANEPRFHQIAQEFIDFISGAEIVAHNANFDVSFMDHEFSLLQPL
GPKTSEICEILDSLDIAKFLHPGQKNNLDALCKRYGIDNSRRLYHGALLDAEILADVYLA
MTGGQTKFNLSNEEVGQEAGGIQRFDPASLNLKVISASADELVMHEKRLDLVAKSGKCLW
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatctcaaacgcaagccgtcaggttattttggatactgaaacaacgggtatg
aaccaaggcagtggtgcagtgtatttaggacacagaattattgagataggttgtgttgag
gtgatcaaccgccgtttaacaggtcgctatttccatcaatatatcaatcccggccaagcg
attgacccagaggcgatagcggttcacggtattaccgatgaacgcgtcgccaatgagcct
aggttccatcaaatagcgcaagagtttatcgattttatcagtggcgccgaaattgtggcc
cataacgcaaacttcgacgtgagctttatggaccatgaattttcgctgttgcagccttta
gggccaaagaccagtgaaatttgtgaaatcttagactccctcgatatcgcaaaattttta
caccctgggcaaaagaacaacttagatgccctgtgtaagcgctacggtatcgataactcc
cgccgcctttaccatggcgcgttactcgacgccgagatcttagccgatgtgtatttggcg
atgacaggtgggcagaccaagttcaatctctctaacgaagaagtcggccaagaggctggt
ggtattcaacgctttgatccggcatcacttaatcttaaagtgatcagcgcatcggccgat
gaactcgttatgcatgaaaaacgtcttgatttagtcgcaaaatcaggaaaatgcctctgg
agaggataa
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