Shewanella decolorationis: D0436_13875
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Entry
D0436_13875 CDS
T09167
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00230
Purine metabolism
sdeo00240
Pyrimidine metabolism
sdeo01100
Metabolic pathways
sdeo01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
D0436_13875 (nrdD)
00240 Pyrimidine metabolism
D0436_13875 (nrdD)
Enzymes [BR:
sdeo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
D0436_13875 (nrdD)
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GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_Tnp_IS91
Motif
Other DBs
NCBI-ProteinID:
QDZ91458
UniProt:
A0A5B8QZK2
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Position
complement(3059493..3061610)
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AA seq
705 aa
AA seq
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MPVVIKRDGCRTPFDETRIRDAVIAAANSVGIEDADYAATVAACVRERVANLAEVEIHHL
QDAVENLLMEGPYKSLARVYIEYRHDRDICRDATSKLNLEIRGLIEQSNAALLNENANKD
SKVIPTQRDLLAGIVAKHYAKSHILPKDVVAAHELGEIHYHDLDYSPFFPMFNCMLIDLA
GMLTHGFKMGNAEIETPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVAKSYD
KHYQVALNWQIKDAKAYATALTEKECHDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSW
ESRLIQQSMLKVRMTGLGKNRKTAVFPKLVFAIRDGINHKAGDCNYDVKQMALKCASMRM
YPDILNYEQVERVTGSFKTPMGCRSFLGSYKENGELVHEGRNNLGVVSLNLPRIALEANG
DEAEFYRILDERLQLARRALDTRIERLNGVKARVAPILYMEGACGVRLRADDDIAQIFKN
GRASISLGYIGLHETINALYGTETHVFDDAKLREKALAIVAHLKAATDAWKAETGYGFSL
YSTPSESLCSRFCKLDARQFGVVAGVTDKGYYTNSFHLDVEKRVNPYDKIDFEQPYPAIA
NGGFICYGEYPNMQHNIEALENVWDYSYSRVPYYGTNTPIDECYDCGFTGEFSCTSKGFT
CPKCGNHEPSRVSVTRRVCGYLGSPDARPFNHGKQEEVKRRIKHL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcgtgatcaagcgggatggttgccgcacaccttttgatgaaacaaggataaga
gatgcagtgatagcggctgcaaactcggttgggatagaggatgctgactatgccgcgacg
gttgccgcctgtgtgagggagcgagtggcgaatctggcagaagtcgagatccaccattta
caggatgcggttgaaaatctcttaatggaaggcccttacaaatccttggcgcgggtctat
atcgagtatcggcacgacagagacatttgccgcgatgcgaccagtaaactcaatctcgaa
atccgtggtttaatcgagcaaagcaatgccgcgctgttaaatgaaaacgccaataaagac
tctaaagtgatcccaacccagcgggatctgctcgcgggtattgtcgcgaagcattacgcc
aagagccatattctgcctaaggatgtagtggccgcccatgaacttggcgagatccattac
cacgatctcgattattcgccgtttttcccgatgtttaactgcatgttgattgatttggca
ggcatgttgacccacggttttaaaatgggcaacgccgaaattgagaccccaaaatccatc
tccaccgctactgctgttacggcgcagattattgcccaagtggcgagccatatttatggt
ggcactacgattaaccgtatcgatgaagtgctcgcaccttttgtggcgaagagctatgac
aaacattatcaagtggcactcaactggcagataaaagatgccaaggcctatgcgacggcg
ctgacagaaaaagaatgtcatgacgctttccaatcccttgaatatgaagtgaatacctta
cataccgccaatggacaaacgccctttgtgacctttggttttggtcttggcacttcgtgg
gagtcgcgtttaattcagcaatccatgttgaaagtgcgtatgacgggcctaggtaaaaat
cgtaagactgccgtgttccctaaactggtgtttgcgattcgtgatggcattaaccacaag
gccggtgattgcaactatgatgtcaaacaaatggccctaaaatgcgccagcatgcgcatg
tatcctgatattttgaactacgagcaagtggaaagagtcacgggatcatttaaaacccca
atgggctgtcgcagctttttaggctcctacaaagaaaatggcgagctggtccatgaaggg
cgcaataaccttggggtggttagcttaaacttaccccgcatagctcttgaggccaatggc
gatgaggctgaattttaccgcattttagatgagcgtttacaacttgcccgccgcgcatta
gatacccgcatcgaacgcttaaatggcgttaaagccagagttgcgccgattctgtatatg
gaaggtgcctgtggtgtgcgcctgcgcgccgatgatgatatcgcccaaatctttaaaaat
ggtcgggcatcgatttcattaggctatatcggtttacatgaaaccatcaatgcgctctat
ggcaccgaaacccatgtgtttgatgatgccaagctgcgtgaaaaagcgctggcgattgtc
gcgcaccttaaagcggctaccgatgcatggaaggccgaaaccggttatggctttagcctt
tatagcaccccgagtgagagcctctgcagccgtttctgcaagctcgatgcgcgccaattc
ggcgtggttgcgggcgtaaccgataagggttactacaccaatagcttccatttggatgtg
gaaaagcgggtgaatccatacgataaaatagattttgagcagccatatcctgcgatcgcc
aatggcggatttatttgctacggcgagtatcccaacatgcagcacaatatcgaagcgctc
gaaaatgtgtgggattacagctatagccgcgtgccttactacggcactaacacgccgatt
gatgaatgctacgactgtggtttcactggtgagtttagttgtaccagtaaaggttttact
tgccctaaatgcggtaaccatgagccaagccgagtatctgtcacccgccgtgtgtgcggt
tacttaggtagcccagacgctagaccattcaaccatggcaagcaagaagaagtgaaacgc
aggatcaaacacttgtaa
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