Shewanella decolorationis: D0436_13920
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Entry
D0436_13920 CDS
T09167
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdeo03400
]
D0436_13920
DNA repair and recombination proteins [BR:
sdeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D0436_13920
Archaeal homologous recombinant proteins
D0436_13920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QDZ91465
UniProt:
A0A5B8QYK5
LinkDB
All DBs
Position
complement(3072016..3073218)
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AA seq
400 aa
AA seq
DB search
MRFIHTSDWHIGRQLHNQSLLEDQAYVLDQIVALAEQHSVDAVIIAGDIYDRSIPPASAV
ALLDAVLNRLITELGLQVLMIAGNHDGHERLGFAAKQMAASGLHIIGPLQADLTPIRLTS
PSGDAYFYPLPYAEPATVRQVFEADAKELSISSHEEAMALLLEQVHSHDSQGLPKVVVSH
CFLDGGSESESERPLSIGGADKISPRLFSEFDYVALGHLHGSQYKGSEHVRYSGSILKYS
FSEQHQHKSVTLVDVAAQTPAQIQLLPLTALRDVRIIEGELAHLLDLGITDAKREDYLMV
RLLDKHAILDAMGKLRSVYPNVLHLERTGLMAGEQAVALNRDHIKKGEMAMFRDFFSQVS
GEELSDAQQAVMDEILTKLHRDEGDSVGSTRVAAKGEQSA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagatttatccatacctcggactggcacattggtcgccagttacataatcaatcactc
ttagaagaccaagcctatgtgcttgatcaaattgtggcattggcagagcagcactctgtc
gatgcggtgattattgccggggatatttacgataggtcgattccacctgccagcgccgtg
gctttgctagatgcggtgcttaatcgccttatcaccgagttagggttacaagtgctgatg
attgctggcaatcacgacgggcacgaacgcttagggtttgccgccaaacaaatggcggca
agtggcttgcacattattgggccgcttcaggctgatttaacgccgatccgcttaaccagc
ccaagtggcgatgcttacttctatccgctgccttacgctgaacctgcaaccgtacgtcaa
gtatttgaggcggacgccaaggagctcagtatatccagccatgaagaggcgatggcgcta
ctgttagaacaagtccactcccacgacagccaagggttacctaaagtcgttgttagtcat
tgctttttagatggtggcagtgagtctgaatccgagcggccattgagtattggtggcgcc
gataaaatttccccacggctttttagtgagtttgactatgttgcccttggccacttgcac
ggatcgcaatataaaggcagtgagcatgtacgttattccggctcgattttgaaatactcc
tttagcgaacagcatcaacacaagtcagtcactttagtggacgttgctgcgcaaactccg
gcgcagatccaactcttgcccttaaccgcgctgcgcgatgtgcggattatcgaaggggaa
ttggcgcatttgttagaccttgggataaccgatgccaagcgtgaggattatctgatggtg
agactcctcgataagcacgctattttagatgccatgggcaaactgcgcagtgtctatccc
aatgtgctgcatctagaacgtacaggattaatggcgggcgaacaggccgttgcactcaac
cgtgaccatatcaaaaaaggcgagatggccatgttccgtgattttttcagccaagtctct
ggcgaggaattgagtgatgcacagcaagcggttatggatgagattttaactaagcttcac
agggatgaaggggatagcgttggatctactcgcgttgcagcaaaaggggagcaatccgca
tga
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