Shewanella decolorationis: D0436_14005
Help
Entry
D0436_14005 CDS
T09167
Name
(GenBank) ExeM/NucH family extracellular endonuclease
KO
K07004
uncharacterized protein
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
D0436_14005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
LTD
K319L-like_PKD
Exo_endo_phos
DUF4131
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
QDZ91478
UniProt:
A0A5B8QZL7
LinkDB
All DBs
Position
1987045..1989891
Genome browser
AA seq
948 aa
AA seq
DB search
MFNNKTLLALAISSICGVAHAADNLIISEYVEGSGNNKAIELYNPTANSIDLSQYQLRFY
FNGSTNVGTTIALNGTLAAGATYVVADNDASADILAVTNQQSSASFFNGDDAIVLTYQDQ
VIDSLGQVGVDPGSEWGSGDLSTQDNTLRRNPDQLIADPIIDDVVSFNTWLGFAKDDISD
LGKFSAGTPTDPVEPPPSSLACGEASTPIHALQGSTNVSPLNGQTLVVEAIVVSNQEAGL
KGIFVQMADNEADNDPQTSEGVFVYTGNAPTGYVAGDRVRLKAKVTEYQGLTELTTVADH
KLCAAGQTLPTAAVVTLPVNSSDDFEPFEGMRVRFSQDLVVNEVYNLGRYGEISLGSSRH
FIGTQVAAPGADALAVTAANLKDSILLDDGLTAQNPDPVIFPAPGLSASNTVRVGDKATS
LTGVMHYGFNLYRIMPTEPVNFVAENPRPQSPVLAEGGNLKVASFNVLNYFNGDGQGGGF
PTARGANTLSEFERQKAKIVSAMVGISADVFGLMEIENDGFGANSAIADLVVGLNAAVGE
NRYAYVIPKVNGNNLSAIGTDAITVGLIYRSDKVSPQGDARILSSANSPLDDASQPLFDD
SKNRPMLTQAFVLNGSEESVVVAVNHLKSKGSECAGDPDMNDGQGNCNITRTRAATAAGQ
WIAEQYPEQGVLLIGDLNSYAKEDPLSALANAGFSELFAKFEKANPYSYVFSGESGQLDH
ALANAALVDKVVDVTEWHINTDEPRVLDYNEEFKTPAQVQDLYASDAYRSSDHDPVVISL
LLEAEKVAPEASFTQVVNGASVQFTSTSTDSDGQIVSTQWDFGDNTQAMGEAVSHTYAQT
GDYLVTLTVTDNDGLSHSSSQMVSVVVENVKKPPVAQIQRINLWLVDMFISTSYDTDGVI
KQHKWKFDNGTRASGPVVFRQARRGEHTVELTVKDNDKLTDTTTLTYR
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataacaaaacgctgttggcgttagccatcagtagcatctgtggcgttgctcat
gctgccgataatctgattatttctgaatatgttgaaggcagcggcaataacaaagccatt
gagctgtacaacccaaccgccaacagcatcgacttaagccagtatcaattgcgcttctat
tttaatggcagcacaaatgtgggcacgactatcgccctgaatggcaccttagcggcaggg
gcaacttatgttgtcgctgataacgacgcatcggccgatattctggcggtgacgaatcaa
caaagcagcgcgagttttttcaatggtgatgatgccattgtgctgacctatcaagaccaa
gtgattgatagtttgggccaagtgggtgtcgatcccggcagtgaatggggcagtggtgat
ttatcgacacaggacaataccctgcgccgcaatcccgatcagttaatcgctgatcctatt
attgatgatgttgtcagctttaatacttggttgggttttgctaaagacgatatctctgat
ttgggtaagttcagcgcgggtactccaaccgatcctgttgagccgccgccgagttcatta
gcctgtggtgaagcctcaacgcctatccatgccctgcaaggttcgactaatgtcagtcca
ttaaacggacaaaccttagtggttgaggccatagtggtgagtaatcaagaagctggcctc
aagggcatcttcgtacaaatggccgacaacgaagctgataacgatccacaaacctcggaa
ggggtgtttgtttataccggtaatgcgcctacgggttacgtggcgggcgatcgtgtacgc
ttaaaggctaaagtcactgaatatcaaggtttaacggaactgactaccgttgccgatcat
aaactttgtgcagcaggacaaaccctaccgacagccgccgtggtgaccttgcctgtgaat
tcgagcgatgactttgaaccctttgaaggcatgcgcgtacgctttagccaagatctggtg
gtgaacgaagtctacaacttaggtcgctatggtgaaatttcactcggtagtagccgtcac
tttattgggacgcaagtcgccgcaccaggcgccgatgccttggccgtcacggctgctaat
ctcaaagacagtattttactcgacgatggcttaacggcgcagaaccctgatcctgtgatt
tttcctgcgccaggtttaagcgcatcgaacactgtgcgtgtgggtgataaagccacaagc
cttactggtgttatgcactatggctttaatctttatcgcattatgccgactgagccagtt
aattttgtggcggaaaatcctcgtccacaatcgccagtgcttgccgaaggcggcaacctg
aaagtcgctagctttaacgtactgaactactttaatggcgatggacagggcggcggtttc
ccgactgcgcgaggtgccaataccctgagtgagtttgagcgtcaaaaagcgaagattgtc
agcgccatggtggggatcagtgctgatgtgtttggtctgatggaaatcgagaacgatggc
tttggcgctaactcggcgattgccgatctcgtggtgggcctcaatgccgccgtgggtgaa
aatcgctatgcctatgttattccaaaggtcaatggcaacaacttaagtgcgattggtacg
gatgcgattaccgtcggtctcatctatcgcagcgacaaagtgagccctcagggtgatgcg
cgtattttatcgagcgctaactctcccttagatgatgcctcgcagccgctattcgacgac
agtaaaaaccgccctatgttgactcaagcattcgtgctaaacggcagtgaggagagtgta
gtcgttgcggttaatcacttgaaatctaagggcagtgagtgtgcaggcgatccagatatg
aacgatggccaaggtaactgcaatattacccgtactcgcgcggcaacggcggcggggcag
tggattgcagagcaatatccagagcaaggcgtactgctgattggcgacttaaactcctat
gctaaggaagatccgctaagcgcattggctaacgctggctttagcgagctgttcgcaaaa
ttcgaaaaagccaatccttattcctatgtattctcgggtgaatcgggccagttagaccac
gcgctcgcgaatgctgcgttagtggataaagtcgtggatgtaaccgagtggcatatcaat
accgatgagccacgcgtgttagattacaacgaagaatttaaaacccctgcgcaggtgcaa
gacctatacgccagtgatgcttatcgctcatcggatcatgatcctgtggtgatttcactt
ctccttgaagctgaaaaagtcgcccctgaagccagcttcactcaggttgtgaatggtgcg
agtgtacaatttacctctacttcaacagatagcgatggccaaatcgtttctactcagtgg
gactttggtgacaacactcaagccatgggagaggccgtatcccacacctatgcgcaaact
ggtgattatcttgtgacgttaactgtgaccgataatgacggcttaagccatagcagctcg
caaatggtgtcagtggtggttgaaaatgtgaagaaaccacccgttgctcaaattcagcgc
atcaatctatggttggtcgacatgtttatttcgactagctatgacaccgacggtgttatc
aagcagcacaaatggaagtttgacaacggcactcgcgccagtggtcccgtagtgtttcgt
caggctcgtcgtggagagcatacagtcgagttaaccgtgaaagacaatgataaattaacg
gatacgacaacactgacataccgttaa
DBGET
integrated database retrieval system
