Shewanella decolorationis: D0436_14275
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Entry
D0436_14275 CDS
T09167
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D0436_14275 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdeo01007
]
D0436_14275 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeo03016
]
D0436_14275 (cysS)
Enzymes [BR:
sdeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
D0436_14275 (cysS)
Amino acid related enzymes [BR:
sdeo01007
]
Aminoacyl-tRNA synthetase
Class I (G)
D0436_14275 (cysS)
Transfer RNA biogenesis [BR:
sdeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
D0436_14275 (cysS)
Prokaryotic type
D0436_14275 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
CysS_C
tRNA-synt_1
tRNA-synt_1f
DUF6155
RNA_binding
HrpB2
Motif
Other DBs
NCBI-ProteinID:
QDZ91524
UniProt:
A0A5B8QYI7
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All DBs
Position
1933138..1934517
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AA seq
459 aa
AA seq
DB search
MLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYE
VNFQRNITDIDDKIIKRANENQEDCNALTDRLIGEMHKDFDALNMIRPDFEPRATLHIAE
IIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMD
FVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIA
QSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRS
QINYSEENLKQARAALERLYTAIKDVDLTVAPAPAEEFVAKFKAAMDDDFNTPEAYSVLF
DMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFFKGEGSDDEVAEIEALIVE
RNRARAEKDWPAADVARNRLNELGVVLEDGPSGTTWRKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagatttacaacagtattacccgtcaaaaacaggaatttaagccaattactccc
gggaaagttgggatgtatgtatgcggggtgaccgtatacgatctgtgtcatattggccat
gggcgtacttttgtttccttcgatatgatcgttcgctacctgcgttacgcgggttatgag
gtgaattttcaacgtaatatcactgacatagatgataaaatcatcaaacgcgccaacgaa
aatcaagaagattgcaatgcattaaccgatcgtttgattggggaaatgcacaaggatttc
gatgcgctgaatatgatccgtcccgatttcgagccacgtgccactctgcacatagctgaa
atcatcgatatggttgagcgtcttctcgcgcgaggccatgcctatgtggctgccgatggc
gatgtgctgttcagtgtggcttctttccctgagtacggtcgcctatcaggtcagaatctg
gagcaattacaggcgggtgcacgggttgaggttgacgataacaagcaaaatccaatggat
ttcgtgctatggaaaatgtctaaaccgggcgagccaacatgggaatcgccatggggacca
ggtcgtccaggctggcatatcgaatgttcggcaatgaacagcaagcatttaggtctgcat
ttcgatattcacggtggcggttcagatttacaattcccgcaccatgagaacgaaattgct
cagtcttgctgcgcccatgatacgccgtatgtgaattactggatgcacactggcatggtg
atggttgaccgcgagaagatgtcaaagtctttaggtaacttcttcaccatccgtgatgta
ttaggccattacgacgctgaaaccgtgcgttacttcctgctatcgggtcattatcgtagc
caaatcaactactctgaagaaaacctcaagcaggctcgtgccgccttagagcgtttatac
actgcgattaaagatgttgacctgactgtagcgccagcacctgccgaagagtttgtcgct
aagtttaaagcggccatggacgatgactttaatacccctgaagcctattcagtgctgttt
gatatggtacgcgagatcaaccgtttgaaaaccaccgatatggcgcaggcgtcagctatg
gccgttgccatgaagcaactggccgatgtattgggattattgcaccaagcgcccgatgcc
ttctttaaaggtgaaggtagtgacgatgaagtggcagagattgaagcgctgatcgttgag
cgtaatcgtgctcgcgccgagaaagattggcctgcggctgatgttgcgcgtaatcggtta
aatgagcttggtgtagtcttagaagatggtccaagtggtaccacttggcgtaagaaatag
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