Shewanella decolorationis: D0436_15150
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Entry
D0436_15150 CDS
T09167
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
sdeo
Shewanella decolorationis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
HTH_30
MCM
HTH_28
AAA_16
Phage_CP76
HTH_50
HTH_7
AAA_22
HTH_Tnp_ISL3
HTH_23
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QDZ91687
UniProt:
A0A5B8R060
LinkDB
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Position
1714456..1715853
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AA seq
465 aa
AA seq
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MIRPTLFYHLQDFETEQALVQLEGAQTYNKLRSTDDLSWISQLEANRIDVAIIELPRLSR
EDYLALLESSAIADVEFIFLSDGLPNPHLDKLLSKYAGYHFRKPIDMSLLCETLADFAQH
LVANTSTRIRPFASELDQYGLLVGSSLPMHRLYRTIRRVSAAESNVLIIGESGAGKELVA
NTIHLASPRVNKPYIAINCGALSPELVDSELFGHVKGSFTGANRDHQGVFEQAEGGTLFL
DEVTEMPLEHQVKLLRVLENNEYRPVGSPKVLKANVRIVAATNRDPLVAIEQGQLREDLY
FRLAHFPIQVPPLRERGEDIVGLAKHFLAYRNAAEKQSKVFSPSSLEMIAAHTWPGNVRE
LKHAIERAYILADHEITPEHLRLTPSLDKESAAEENVVIPQGMRLEELEKIAIYQALETS
QGNKTDTAEQLGISVKTLYNKLSKYEQESDVQTAGADSVSNSVAK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaccaacgcttttctatcatctacaggacttcgagaccgagcaggcattagtg
cagctcgagggcgcgcagacctacaacaagctacgcagtaccgatgatttatcttggatt
agtcagctggaggccaatcgtatcgatgtggcgatcattgagctgccccgtctaagccgt
gaagattacttagccttactcgagtcgagcgccattgcggatgtggagtttattttcctc
tccgacggcctgccgaatcctcacctcgataaactcttgtccaaatacgcgggctaccat
ttccgtaagcccatcgatatgtcgttactgtgcgaaaccttagcggattttgcccagcat
ctggttgccaatacctcgacacgcattcgcccctttgccagcgagttagatcaatatggt
ctgctggtgggctcctcattacctatgcaccgcttgtatcgcactatccgccgcgtgtcg
gccgccgagagcaatgtgttgattatcggtgagagtggcgcgggtaaagaactggtcgcc
aataccattcacttagccagcccgcgggtgaataagccctatattgcgattaactgcggc
gctttgagcccagaattggtcgatagtgaactcttcggccatgtaaaaggctcctttacc
ggtgcgaatcgcgatcatcaaggggtatttgagcaggccgaaggcggcaccttattcctc
gatgaagtcaccgaaatgccgcttgagcatcaagttaagctattaagagtgctcgaaaat
aatgaatatcgccctgtcggcagccctaaggtgctcaaggcgaatgtgcgtattgtggcg
gcgacaaaccgcgatcctttagtggcgattgagcaaggacaactgcgggaggatttgtac
tttcgcttagcgcatttccccattcaagtgccgccattacgggagcgcggggaagatata
gtgggactggcgaagcattttctggcctatcgcaatgcggcggaaaaacagagcaaagtg
ttctcgccctcaagtttagagatgattgcggcccacacttggccggggaatgtgcgcgag
ttaaagcatgctatcgagcgcgcttatattctggcggaccatgagattacccctgagcat
ttacggctgacgcccagtttggataaagagtcggctgcggaggaaaatgtagtgatcccc
caaggtatgcgccttgaggagctggagaaaatcgccatttaccaagcgcttgaaacaagt
cagggcaataagactgacaccgccgagcagcttgggatcagcgttaaaaccctctataac
aagcttagtaaatatgagcaggagtcagacgttcaaaccgctggtgcagattccgttagc
aatagcgtcgccaagtag
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