Shewanella decolorationis: D0436_15385
Help
Entry
D0436_15385 CDS
T09167
Name
(GenBank) transcriptional regulator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdeo03000
]
D0436_15385
Transcription factors [BR:
sdeo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
D0436_15385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
KDM5_C-hel
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QDZ91731
UniProt:
A0A5B8R0L3
LinkDB
All DBs
Position
1659379..1660290
Genome browser
AA seq
303 aa
AA seq
DB search
MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL
LLTEEGQSYFLDIKDIFTQLADATDRLLARSAIGSLTVSMSPSFAIQWLVPRLSKFSEKN
PDIDVRIKAVDTEASSLTDDVDVAIYYGLGNWPGLRADKLRNEVLIPVCSPMLLNGPKPL
SKPEDLKHHTLLHDMSRHDWQAWFRQCGIHDINVNQGPIFSHSSLVLQAAAHGQGVALGY
SVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWMLDMFAEESRSEL
LPG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacgcttaccaccactgaatgcggttaaagcatttgaggccgccgcacggcat
ttgagctttactcgagcggctgaagaattgtttgtgactcaggctgcggtgagtcaccaa
attaaagcgctggaagattttctcggattaaaattatttcgccgaaagaatcgatcactg
ttactgaccgaagaaggccagagctattttctcgatattaaagatatcttcacccaactg
gcggatgcgaccgacaggctgcttgcgcgtagcgccattggttcgttgacagtgagcatg
tcgccaagctttgctattcagtggctggtaccgcgcctgtcgaagtttagtgaaaaaaat
ccagacattgacgtacgaattaaggcggtagacacagaggccagctctttaaccgacgat
gtcgacgttgccatttattatggtttaggcaattggccagggcttcgcgccgataaactc
cgtaatgaagtgctgatccccgtatgttcgcccatgctgttaaacggccctaagcccttg
tctaagccagaagatttaaaacaccacaccttgctgcacgatatgagccgtcacgattgg
caggcttggtttagacaatgtggcattcacgatatcaacgtcaaccaagggccgattttc
agtcattcttccctcgttttgcaggctgctgcccacggccaaggtgtggccttaggttat
agcgtactcgctcgccccgatattaaggcgggtcgacttgtttgcccattccaagaagtg
ttagtgagcaaagatgcctattacctcgtctgccaacagaatcatgccgagctgggtaaa
gtggtcgcgttccgtgagtggatgttagatatgtttgccgaggagtcacgcagtgagttg
ttgcccggataa
DBGET
integrated database retrieval system
