Shewanella decolorationis: D0436_15415
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Entry
D0436_15415 CDS
T09167
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00900
Terpenoid backbone biosynthesis
sdeo01100
Metabolic pathways
sdeo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
D0436_15415 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sdeo01006
]
D0436_15415 (ispA)
Enzymes [BR:
sdeo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
D0436_15415 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
D0436_15415 (ispA)
Prenyltransferases [BR:
sdeo01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
D0436_15415 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF7227
CdvA
Motif
Other DBs
NCBI-ProteinID:
QDZ91737
UniProt:
A0A5B8R0A8
LinkDB
All DBs
Position
complement(1654062..1654943)
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AA seq
293 aa
AA seq
DB search
MLVNAIKEYQLRVDDQLKQRFSTLEDTAPQLKAAMTHGALLGGKRIRPFLVYSVGQMFGV
PLEKLDACAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDALQTLA
FEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLHNMKT
GALISCAVELALIAANAPKDEYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDA
ESNKSTFPQLLGLQGAKDTAAQLIQEALSALAKLPYNSQLIADFARYIIERRI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgttagtcaatgcaataaaagaatatcaactaagggttgatgaccaattaaaacaacgt
tttagtacactcgaagacacagcaccgcaattaaaggccgccatgacccacggcgcgcta
ttaggcggtaagcgtattcgtcctttcttggtttacagtgtggggcaaatgtttggcgtg
ccgcttgaaaagctcgacgcctgcgccgccgccattgagtgtattcatgcttattcgtta
atccatgacgatttacccgccatggacgatgacgaccttcgccgtggtcaacccacagtg
catatcgccttcgatgaagcgaccgctatacttgctggggatgccttgcaaaccttagcc
tttgaaattgttaccgaagctgtgccagggatcagcagcgagcaacatatcgccatggtg
agagcgctggcgaaagcctcgggttaccgtggtatgtgtggcggccaagcgattgactta
gcctcaaccgataagctcatcgaccttaaggccttaactcaactgcataatatgaaaacg
ggcgcccttatcagctgcgccgttgagttagccctgattgccgccaatgcgccaaaagat
gaatatcagactatgatggaatttgcccatgcggtaggacttgccttccaagtgcaagac
gatattctggacatcattgccaccacggaagaactcggcaaaccccaaggctctgatgct
gaatcaaataagagtacttttccgcaactacttggactgcaaggcgccaaagacaccgcc
gcgcaactgatccaagaggcactatcagcgctggctaaattgccatacaatagccagtta
attgcagacttcgcccgctatatcattgagcgaagaatataa
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