Shewanella decolorationis: D0436_15930
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Entry
D0436_15930 CDS
T09167
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D0436_15930 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeo02000
]
D0436_15930 (lptF)
Transporters [BR:
sdeo02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
D0436_15930 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Phage_capsid_2
Motif
Other DBs
NCBI-ProteinID:
QDZ91827
UniProt:
A0A5B8R0I8
LinkDB
All DBs
Position
1498748..1499860
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AA seq
370 aa
AA seq
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MIVFRYLIREVLKAQIAVLFVLLTIFISQHFVRILADASDGEFPASLIATLIGLNLPYLV
VLVLPLSLFLGILMAHGRMYAENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYV
APWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNDLDKVFVAQLPD
PNDEIGLTNVVVAKGGRVIEDQNGSQQLQLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQ
QVDERRRKLSALPLTELMKVEGPEAVAEFHWRLAIPLAIPIMTLIAVPLARVNVRQGKFA
KMLPAVLLYLGYFGLMVAGRKALQDGVIPQYLGMWWIHLSALIMGILLLGKDRPLFARLS
TAMARKKVAA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtatttagataccttattcgagaagttttaaaggcgcaaattgcagtacttttc
gtactgttaactatttttattagccagcatttcgtgcgcatattggccgacgcctcagac
ggtgaatttccagcttctcttatcgctaccttgataggtctcaacttaccctatctggtt
gttctcgttttacctttaagtttgttccttgggatccttatggcccatggccgcatgtat
gccgagaatgaaatggtcattctccacggtgttggcgtaagtgaatggtatgttacccga
gtaactttgattctagccgttatcaacatgttgtttactggctatttatctctctatgtc
gcgccttgggccgaggagcaacaaaaccaagtgctcgaaaaagcccaatccgaggcgggc
cttgccgcgttagtgcaagggcgttttcaggcgagtcctaacggccgtgctgtgctgttt
gttgagcgtatcggcaaggataacgacttggataaagtgtttgttgcccagttacccgat
ccaaatgacgaaattggcttaaccaatgtggttgtagctaaaggtgggcgtgtcattgaa
gatcaaaacggctcgcagcaattacagctcaatgatggggtacgctatcagggcagccca
caacagaaagactaccaaatgattgaatttggtggctataagatgcaaatcaaagagcaa
caggtcgatgagcgtcgccgcaagctctcagccttaccgctcactgaattgatgaaagtc
gaaggaccagaagccgtggccgagttccattggcgtttagcgattccgctggcgattcct
atcatgacactcattgccgtgccgctggcgcgagtcaatgtgcgccaaggaaaatttgcc
aaaatgcttcccgcggtgctgttatatcttggctattttggcctgatggtcgcgggacgt
aaagccttgcaagatggggtgatcccacagtatttaggcatgtggtggatccatttgtca
gcactcattatggggattttactcctaggtaaagacagacccttatttgctcgtttatcg
acggcaatggcgcgtaaaaaggtggccgcatga
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