Shewanella decolorationis: D0436_16090
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Entry
D0436_16090 CDS
T09167
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdeo03000
]
D0436_16090 (nhaR)
Transcription factors [BR:
sdeo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
D0436_16090 (nhaR)
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
MarR
Motif
Other DBs
NCBI-ProteinID:
QDZ91856
UniProt:
A0A5B8R171
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Position
1466962..1467870
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AA seq
302 aa
AA seq
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MLHLNYNHLYYFWMIKKKGSVAKAAEALCLTPQTITGQIRALEDRLNGSLFKRVGRNLEA
TELGELVFRYADKMFSLSYEMLDLLNYQKDDALLFEVGIADALSKALASRVLLSVVPNDG
SMHLACYEATHESLMTRLREHKLDMILSDCAGESLKYPEILSKKLGECGVSFFSAETYSA
DFPACLEQGQLLIPGRRTSLGQQLYRWFDEQNLKVSILGEFDDAAMMKAFGYLKRGIFVT
PSVYPQEVISHGMHLLGETLDVKEEYHVMFAERMIQHPAVKRLLETDFSDLFAGLDSQVQ
RC
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatcttaattacaaccatctttattatttctggatgatcaaaaagaagggctct
gtggctaaggcggccgaagccctttgtctgacgccccaaaccatcacggggcaaattcgt
gccctcgaagatcgtcttaacggcagtctattcaaacgtgttggacgtaatttagaggcg
acagaactcggtgagctggtatttcgctatgccgataagatgttttccctcagttatgag
atgctcgatttactcaactatcaaaaagatgatgcccttttatttgaagtcggtattgcc
gatgccttgtctaaggctttggcgagtcgcgtactactttctgttgtgccgaatgacggc
tccatgcaccttgcttgttatgaagcgacccacgaaagtttaatgactcgtttacgcgag
cataaactggatatgatcctctcggactgtgcgggtgagtcattgaaataccctgagatt
ttatcgaaaaaactgggtgagtgtggcgtaagctttttctccgccgaaacctatagtgcc
gattttcccgcttgtttagagcaaggacaattgctgatcccaggccgaagaacatcgctt
gggcaacaattataccgttggtttgatgagcaaaatcttaaggtcagcatcttaggtgag
tttgatgatgcggcgatgatgaaggcctttggctacctgaaacgcgggatcttcgtcacg
ccgtcggtctatccgcaagaagtgatttcccacggcatgcatttgctcggcgaaacttta
gatgtgaaggaagaataccatgtgatgtttgccgagcggatgatccaacatccagcggtg
aaacgtttattagagacggatttcagtgatttatttgccggattagacagccaagttcag
cggtgctaa
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