Shewanella decolorationis: D0436_16375
Help
Entry
D0436_16375 CDS
T09167
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00250
Alanine, aspartate and glutamate metabolism
sdeo00280
Valine, leucine and isoleucine degradation
sdeo00310
Lysine degradation
sdeo00410
beta-Alanine metabolism
sdeo00640
Propanoate metabolism
sdeo00650
Butanoate metabolism
sdeo01100
Metabolic pathways
sdeo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
D0436_16375 (gabT)
00650 Butanoate metabolism
D0436_16375 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
D0436_16375 (gabT)
00280 Valine, leucine and isoleucine degradation
D0436_16375 (gabT)
00310 Lysine degradation
D0436_16375 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
D0436_16375 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdeo01007
]
D0436_16375 (gabT)
Enzymes [BR:
sdeo01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
D0436_16375 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
D0436_16375 (gabT)
2.6.1.48 5-aminovalerate transaminase
D0436_16375 (gabT)
Amino acid related enzymes [BR:
sdeo01007
]
Aminotransferase (transaminase)
Class III
D0436_16375 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QDZ91907
UniProt:
A0A5B8R0R0
LinkDB
All DBs
Position
1399486..1400763
Genome browser
AA seq
425 aa
AA seq
DB search
MSTTNDSLMARRQAAVAGGVGQIHPVFTARAENATVWDVEGREFIDFAGGIAVLNTGHLH
PKVKAAVAAQLEDFSHTCFMVLGYESYIQVCEKLNQLVPGDFAKKTALFTSGSEAVENAV
KVARAYTKRAGVIAFTSGYHGRTMAALALTGKVAPYSKGMGLMSANVFRAEFPCALHGVS
DDDAMASIERIFKNDAEPSNIAAIILEPVQGEGGFYAASPAFMQRLRALCDREGIMLIAD
EVQTGAGRTGTFFAMEQMGVSADITTFAKSIAGGFPLSGITGKAEVMDAIGPGGLGGTYG
GNPLACAAALAVLEVFEEEKLLERANAIGERIKSALNTMQVEHPQIADVRGLGAMIAIEL
MEEGKPAPQYCAQILAEARNRGLILLSCGTYGNVLRILVPLTVPDEQLAAGLGILKASFD
AVLKG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaccaatgattcattgatggcacgtcgccaagccgcagtcgcaggcggtgtt
ggtcaaattcatcctgtttttactgctcgcgccgaaaacgcgaccgtgtgggatgtggaa
ggtcgagagtttatcgactttgcgggtggtattgctgtgcttaacactgggcatttacat
cctaaggttaaggcagccgttgcggcgcagcttgaggacttctcccacacctgttttatg
gtgcttggctatgaaagttatattcaagtctgtgaaaaactgaatcagttagtgccgggt
gattttgctaagaaaacggccttattcaccagtggctcagaagccgttgaaaacgcggtt
aaagttgctcgtgcatacactaagcgggcgggtgtgattgcctttacctcgggttaccat
ggtcgcactatggcggcgctcgcattaacgggaaaggtcgcgccttacagtaaaggcatg
ggattaatgtcggctaatgtgttccgcgccgagtttccctgtgcactgcacggcgtgtcc
gatgatgatgcgatggcctctatcgaacgtatctttaaaaatgatgccgagccgagcaat
atcgcggccatcatcctcgagcctgtgcagggggagggcggattctatgccgcatctcca
gcctttatgcaacgtttacgtgcgctttgcgaccgcgaaggcattatgctgatcgccgat
gaagtgcaaacgggtgcgggtcgcactggaaccttcttcgcgatggagcaaatgggcgtg
agcgccgatatcaccacctttgcgaaatccattgccggtggcttcccactatcgggtatt
acgggtaaagcggaagtcatggatgccatcggtcccggtggccttggcggcacctacggt
ggtaatccgctggcctgtgcggcggcgctcgccgtactcgaagtgtttgaagaggaaaag
ctgcttgaacgtgccaatgcaattggcgagcggattaagtcggcgctaaatactatgcag
gttgaacatccacaaattgctgatgtgcgtggtctaggggcgatgatcgctattgaattg
atggaagagggcaaacccgcgcctcagtactgtgcccaaattttagctgaggcaagaaac
cgaggtttgatcctcctctcctgcggcacctacggaaacgtgctgcgtatattggtgcca
ttaacagtgccagatgagcagcttgccgcggggctgggcattcttaaggccagtttcgat
gccgtgttaaaaggttaa
DBGET
integrated database retrieval system
