Shewanella decolorationis: D0436_16380
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Entry
D0436_16380 CDS
T09167
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00250
Alanine, aspartate and glutamate metabolism
sdeo00310
Lysine degradation
sdeo00350
Tyrosine metabolism
sdeo00650
Butanoate metabolism
sdeo00760
Nicotinate and nicotinamide metabolism
sdeo01100
Metabolic pathways
sdeo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
D0436_16380 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
D0436_16380 (gabD)
00310 Lysine degradation
D0436_16380 (gabD)
00350 Tyrosine metabolism
D0436_16380 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
D0436_16380 (gabD)
Enzymes [BR:
sdeo01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
D0436_16380 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
D0436_16380 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
D0436_16380 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QDZ91908
UniProt:
A0A5B8R0R5
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Position
1397935..1399383
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AA seq
482 aa
AA seq
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MLLKDPSLLRQQCYINGQWCDAQSKETVAIANPATGAVIASVPVMGQAETQAAIAAAEAA
LPAWRALTAKERGAKLRRWFELLNENSDDLALMMTTEQGKPLAEAKGEVTYAASFIEWFA
EEAKRVYGDTIPGHQGDKRIMVIKQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMVVK
PAPQTPFTALALAVLAERAGIPAGVFSVITGDAIGIGNEMCSNPVVRKLSFTGSTQVGIK
LMEQCAPTLKKLSLELGGNAPFIVFDDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQAG
VYDEFARKLSIAVGKLKVGEGIGEGVTTGPLINRAAVEKVQSHLEDALSKGATVVAGGKP
HSLGGNFFEPTVLTHVDSSMRVAREETFGPLAPLFKFTDVDDVIKQANDTEFGLAAYFYG
RDISLVWKVAEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKFGIEEYLEIKYICM
SV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgttgttaaaagacccgagtctgctgcgtcagcaatgttatatcaatggtcagtggtgc
gatgcacagtcaaaagaaaccgtcgctatcgccaatcctgcgacgggcgctgtaatcgcc
agtgtccctgtgatggggcaagccgaaactcaagcggcgattgcggcagccgaagccgcc
ttgcccgcatggcgagcacttactgcaaaagagcgtggtgccaagctgcgtcgctggttt
gaattactcaatgaaaacagtgatgacttagcgctaatgatgaccactgagcagggcaaa
ccccttgccgaagctaagggggaagtcacctacgccgcctcctttatcgaatggttcgcc
gaagaagcaaaacgcgtctatggcgatacgattcctgggcatcagggcgataaacgcatc
atggtgattaagcagcccgtgggtgtgacagcagctattactccctggaacttccctgca
gcgatgatcacccgcaaagccgcgccagcactggctgcgggttgtactatggtggtgaaa
cctgcaccgcaaacgccatttaccgcattagccttggccgtgcttgccgagcgcgccggg
atccccgctggggtattcagcgtgatcactggcgatgctatcggcattggtaatgagatg
tgcagcaacccagtcgtgcgtaagttgtctttcaccggctcgacccaggtgggcattaag
ttgatggaacaatgcgcgccgacactgaagaaattatctttagaattaggcggtaacgcg
ccatttatcgtattcgacgatgccaatattgatgcggcggtcgaaggcgccatgatcgct
aagtatcgcaatgcggggcaaacctgtgtctgcgctaaccgcatttatgttcaggcgggc
gtgtatgatgaatttgcccgcaagctcagcattgccgtgggcaaattaaaggtgggtgag
ggcattggtgagggcgtaactactggaccgcttatcaatcgcgcggcggtcgaaaaagtc
cagagccatctcgaggatgcgctcagtaaaggggcgactgtggttgcgggcggtaagccc
catagcttaggtggcaacttcttcgaacccacggtactgacacatgttgatagcagtatg
cgtgtcgcccgtgaagaaacctttggcccactggcgccgctgtttaagtttaccgatgtg
gacgatgtgattaaacaagccaatgataccgagtttgggttagcggcttatttttatggc
cgtgatatttcactcgtatggaaagtggccgaggcattggaatacggcatggtgggcgtc
aacactgggttgatttccaccgaagtcgcgccgtttggcggaatgaaatcctcggggctc
ggtcgagaaggttctaagttcggcatcgaagaatatttagaaatcaaatatatctgcatg
tctgtttaa
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