Shewanella decolorationis: D0436_16770
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Entry
D0436_16770 CDS
T09167
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00260
Glycine, serine and threonine metabolism
sdeo00460
Cyanoamino acid metabolism
sdeo00630
Glyoxylate and dicarboxylate metabolism
sdeo00670
One carbon pool by folate
sdeo00680
Methane metabolism
sdeo01100
Metabolic pathways
sdeo01110
Biosynthesis of secondary metabolites
sdeo01120
Microbial metabolism in diverse environments
sdeo01200
Carbon metabolism
sdeo01230
Biosynthesis of amino acids
sdeo01240
Biosynthesis of cofactors
sdeo04981
Folate transport and metabolism
Module
sdeo_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D0436_16770
09102 Energy metabolism
00680 Methane metabolism
D0436_16770
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
D0436_16770
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
D0436_16770
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
D0436_16770
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
D0436_16770
Enzymes [BR:
sdeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
D0436_16770
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QDZ91975
UniProt:
A0A5B8R049
LinkDB
All DBs
Position
complement(3655089..3656342)
Genome browser
AA seq
417 aa
AA seq
DB search
MLKKDMNIADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGRLYNIIPYGIDESGKIDYDEMERLAVEHKPKMMIGGFSAYSGI
VDWARMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIIL
SAADDEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKAYQQQVVKNAKAMVE
VFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAEAKELTGWICDILDDAHNPAVIERVKGQVLALCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatatcgcagattatgatccggaactgttcaacgcaattcag
aacgaaactctgcgtcaagaagagcatattgagctgattgcttctgaaaactacaccagt
ccacgcgtgatgcaagcgcaaggttcacaattaaccaacaagtacgccgaaggttaccca
ggcaagcgttactacggtggttgtgagtatgtggacgtagttgaaaccttagcgattgag
cgtgcaaaacaactgtttggtgcgacttacgcaaacgtacaacctcactcaggttctcaa
gcaaacagcgccgtttacatggcattgttaaaaccaggcgataccgttttaggtatgaac
ctcgctcatggtggtcacttgacccacggttcacctgtaaacttctccggtagactgtac
aacatcattccttacggcatcgatgaatcaggcaaaatcgactacgacgaaatggaacgt
ctggcggttgaacataagcctaagatgatgatcggtggtttctctgcttactcaggcatc
gttgactgggcaagaatgcgcgaaattgcagacaaaataggtgcttacctgtttgtcgac
atggcacacgttgcgggtcttatcgccgctggtgtgtatccaaacccagtgccacacgct
cacgttgtgacgtcaaccactcacaagaccttagccggtcctcgtggtggtatcattctg
tctgctgccgacgatgaagagctgtacaagaagctgaactcagcggtattcccaggcggt
caaggcggtcctttgatgcacgttatcgcgggtaaagcggtcgccttcaaagaagcttta
gagccagagttcaaagcttaccaacaacaagtggttaagaacgctaaagccatggttgaa
gtgttcttagagcgcggttacaagatcgtttctggcggtactgacaaccacttaatgctg
gtggacttaattggtcgcgacctgacgggtaaagaagccgatgccgctttaggtagcgca
aacatcacagtaaacaaaaactctgtgccaaacgatccacgttctccattcgtgacctct
ggtgtacgtattggtacgcctgcgatcactcgccgtggctttaaagaagctgaagcgaaa
gagttaaccggttggatctgtgacatcctcgacgatgcccacaatccagcggttatcgag
cgcgtaaaaggccaagtattggcactgtgcgcccgtttccctgtttacggttaa
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