Shewanella decolorationis: D0436_17090
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Entry
D0436_17090 CDS
T09167
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeo02000
]
D0436_17090
Transporters [BR:
sdeo02000
]
Other transporters
Pores ion channels [TC:
1
]
D0436_17090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
OprF
DUF748
TSP_3
Opacity
Autotransporter
YqbF
Motif
Other DBs
NCBI-ProteinID:
QDZ93301
UniProt:
A0A5B8R743
LinkDB
All DBs
Position
3736525..3737637
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AA seq
370 aa
AA seq
DB search
MDLEKMMKNTLKVVLLTSMLPLAASASQELTPWYVGAGLGVNNYEHIATDNGDDNPYAWD
IFAGYMFNDYFGAEIGFRDLGSADWTTGGISNDADVKGATLGLVGVWPLGNRWSLSAEAG
AMYYTLENSQRTATSSSSYSSNDFAPYFGAGVGYNFTDNLKLQAKYRRYENLDDTDFNTI
EADSNYWGLELSYRFGTPAVAAPVAAAVVAAAPVDSDNDGVYDDKDQCPATPATHKVDSV
GCTIYENVKKQEDVGSIQFANDSAVVKKEYYKDIERLANYLNKNPEFTVEIAGHASNVGK
PEYNMVLSDKRADAVAKILVEKYGISQSRVTSNGYGITKPLVAGDSKEAHAANRRIEAIV
TTTEKQPVLK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggacttagagaaaatgatgaagaatacattaaaagtagttttgcttacatcaatgctt
ccacttgctgccagcgcatctcaggaacttacaccttggtatgttggcgcaggtttaggc
gttaataactatgaacacatcgcaactgacaacggtgacgataatccatatgcatgggac
atcttcgctggctatatgtttaatgactactttggtgcagaaatcggctttcgtgatcta
ggtagtgctgattggaccactggtggcatcagcaacgatgcagacgtaaaaggtgcaact
cttggcctagttggtgtatggccgctaggtaaccgttggagcctatctgctgaagcaggt
gcaatgtactacaccctagaaaacagccaacgtactgctacatcgtctagctcttacagc
tctaatgattttgcaccttactttggtgctggtgttggctataacttcactgataacctg
aagttacaagctaaataccgtcgctatgaaaacttagacgatactgacttcaacacgatt
gaagctgacagcaactactggggcttagaattaagctaccgttttggtactccagcagtc
gcggctcctgtagctgccgctgtagttgcagcagcaccagttgactcagacaacgatggt
gtttacgacgataaagatcagtgtccagctactccagcaactcacaaagttgactctgtt
ggctgtactatctatgaaaacgttaagaagcaagaagatgttggttctatccagtttgct
aacgattctgcagtagtgaagaaagagtactacaaagacatcgaaagactggctaactac
ctgaacaagaacccagaattcacagttgaaattgcgggtcacgcttctaacgtaggtaaa
ccagaatataacatggttctgtctgacaagcgtgctgacgctgttgctaagatccttgtt
gaaaaatatggcatcagccaaagtcgtgtaacttctaacggttacggtatcactaagcca
ttagtggctggtgactctaaagaagctcatgctgcaaaccgccgcatcgaagctatcgtg
acaactactgaaaaacaacctgttctgaagtaa
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