Shewanella decolorationis: D0436_17480
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Entry
D0436_17480 CDS
T09167
Symbol
cgtA
Name
(GenBank) Obg family GTPase CgtA
KO
K03979
GTPase [EC:3.6.5.-]
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdeo03009
]
D0436_17480 (cgtA)
Ribosome biogenesis [BR:
sdeo03009
]
Eukaryotic type
Other ribosome biogenesis factors
D0436_17480 (cgtA)
Prokaryotic type
GTPases
D0436_17480 (cgtA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP1_OBG
MMR_HSR1
FeoB_N
GTP_EFTU
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QDZ92101
UniProt:
A0A5B8R2P0
LinkDB
All DBs
Position
complement(3823003..3824169)
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AA seq
388 aa
AA seq
DB search
MKFVDEAVIRVEAGDGGSGCVSFRREKYIPDGGPDGGDGGDGGSVYLQADENHNTLIEYR
FERFHMAERGENGRGRDCTGHSGKDLILKVPVGTRAIDDETEEVLGDLTTHGQKLLVAKG
GFHGLGNTRFKSSTNRAPRQKTLGTPGEVRSLKLELLLLADVGLLGMPNAGKSTFIRAVS
RATPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGAAEGAGLGIRFLKHLERCRI
LLHIIDIEPIDGTDPVDSARAIVGELEKYSPKLASKPRWLVFNKADLLLEDELKEKVDRV
VKELGWEGEVYTISAYSRDGTKELATKLLDFIQSLPPEDKDANPDAEVEFKWDNYHQANI
DAINEDYDDEFDDDFDDDDYDVEVIYQR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgtcgatgaggcagtaattagggtcgaagcaggcgacggcggtagcggttgt
gtgagtttcagacgcgaaaaatatatccccgatggtggtcctgatggtggtgatggtggc
gatggtggcagtgtctatctgcaggccgatgaaaaccacaacaccctgattgaataccga
tttgaacgttttcacatggctgagcgcggtgaaaatggccgaggccgtgactgtactggc
catagcggtaaagatttgattttaaaagtgcctgtgggtacgcgtgctattgatgatgaa
accgaagaagtcctcggcgatttaaccacccatggccaaaagctattagtggctaaaggc
ggattccacggcttaggcaacacgcgctttaagagcagtactaaccgtgcgccacgtcaa
aagaccttaggtactccgggtgaagtccgtagcctgaaattagagctgctgttgttagcc
gacgttggcttgctgggtatgcctaacgcgggtaagtcgacctttattcgcgccgtatca
cgtgcaacgccaaaggttgccgattaccccttcacgacattagtacctaacctcggtgtg
gttaaccctcgccctggtcaaagctttgtgatcgccgatattcctggtttgatcgaaggc
gcggcagaaggcgcaggtctgggtattcgcttcttaaagcacttagaacgttgccgtatt
ctgttacatatcatcgatatcgagcccattgatggcacagatcctgtggattctgcccgt
gcgatcgtcggtgaacttgaaaaatattcgccgaaattggcgagcaagccacgttggtta
gtctttaacaaggccgatttgctgctcgaagatgagctgaaagagaaagtggatcgcgtt
gttaaggaactaggttgggaaggtgaggtttataccatttctgcctatagccgcgatggc
actaaagagttagccaccaagctgctggacttcatccaaagtcttccaccggaagataaa
gatgcgaacccagatgcagaggttgagttcaagtgggacaattatcatcaagccaacatt
gatgcgatcaatgaagactatgacgatgaattcgacgatgactttgatgatgacgactac
gatgtagaagtgatctaccaaagataa
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