Shewanella decolorationis: D0436_17760
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Entry
D0436_17760 CDS
T09167
Name
(GenBank) cobalamin-binding protein
KO
K06858
vitamin B12 transport system substrate-binding protein
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D0436_17760
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeo02000
]
D0436_17760
Transporters [BR:
sdeo02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Vitamin B12 transporter
D0436_17760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_2
OprB
Motif
Other DBs
NCBI-ProteinID:
QDZ92149
UniProt:
A0A5B8R1P5
LinkDB
All DBs
Position
complement(3878197..3879021)
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AA seq
274 aa
AA seq
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MLIRRFIALGLSFALLPIATMAEPAKRIIALSPHAVEMLYAIGAGESIVAATDYADYPEA
AKKIPSIGGYYGIQIERVLELNPDLIVVWDTGNKAEDINQLKNLGFKLYSSSPKMLEDVA
KEIEELGELTGRTEQASRVAADYRSELLRLRSENAAKSEPKVFYQLWSTPLMTVAKNSWI
QQIIGVCHGKNVFYDAASDYPQVSLENVLLTLPEVILQSEEEGNVKGIDWSKWTEIPAVK
NQHIYQLNADLLHRATPRALLGVKAVCDALDKAR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgttaatccgacgctttattgccctcggtctgagctttgcgctgttacccatagcgacg
atggccgagcctgcaaaacgtattattgcgctttcgccccatgcggttgaaatgctctac
gccatcggcgcgggggagtcgattgtggccgcgaccgattatgcggattatcccgaagcg
gcgaaaaaaatccccagtatcggtggttactatgggatccagattgagcgggtattagaa
cttaatcccgatctgattgtggtgtgggacacgggcaataaagccgaggatatcaaccaa
ctcaaaaacttaggttttaaactttatagcagctccccaaagatgcttgaggatgttgcc
aaagaaattgaggaattaggtgaactgacgggacgcactgagcaggcgagtcgagtggcg
gcggattatcgcagtgagctgctgcgattacgtagcgagaatgcggctaaatccgaacca
aaagtgttttatcagctatggtccacgcccttaatgacagtcgccaaaaacagttggatc
cagcagattatcggtgtgtgtcatggcaaaaacgttttttatgatgcggcgagtgattac
ccgcaggtgagtttagagaatgtgttactgaccttgcccgaggtgattttacagagcgaa
gaggaaggcaatgtcaaagggatagattggagcaagtggaccgaaatccccgcggttaaa
aaccagcatatttatcaattaaatgctgatctattgcaccgcgcaacacctagggcatta
ctcggtgtgaaggcggtctgtgatgccttggataaagcacgttaa
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