Shewanella decolorationis: D0436_17885
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Entry
D0436_17885 CDS
T09167
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D0436_17885 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdeo01007
]
D0436_17885 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeo03016
]
D0436_17885 (lysS)
Enzymes [BR:
sdeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
D0436_17885 (lysS)
Amino acid related enzymes [BR:
sdeo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
D0436_17885 (lysS)
Transfer RNA biogenesis [BR:
sdeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
D0436_17885 (lysS)
Prokaryotic type
Other AARSs
D0436_17885 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
IPPT
Motif
Other DBs
NCBI-ProteinID:
QDZ92173
UniProt:
A0A5B8QZR6
LinkDB
All DBs
Position
complement(3908737..3910239)
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AA seq
500 aa
AA seq
DB search
MTEQVQDENKLIAERRAKLESIRPNCSANAHPNTFRRTHKAAELQEKYGQNTKEELEALG
FKTSIAGRIMAKRGPFLVIQDVSGRIQAYAEKGVQADLKDRYQGLDIGDIIGVTGQLHLS
GKGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVV
AAIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSIAIELLGSAQM
PYGEHTVDFGGPYARLSMLEAIQKYNPDNATIQAMTYEQVKDLEFMRELAISLGIKIEKF
WTCGQLLEEIFGETAEWQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVAN
GFSELNDAEDQDSRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaagtacaagatgaaaacaaactgattgccgagcgtcgtgccaagctagaa
agcattcgcccgaactgcagcgctaatgctcaccctaatactttccgtcgcacccacaaa
gcggctgagttgcaggaaaaatacggtcaaaacactaaggaagaactcgaagccttaggt
tttaaaaccagcatcgctggccgtatcatggcaaaacgtggcccattcctggtgatccaa
gacgtgtctggtcgtatccaagcttacgctgaaaagggcgttcaagcggatctgaaagac
cgttaccaaggtctggatatcggtgacatcatcggcgtaacgggtcagttgcacttgtct
ggtaaaggcgatctgtacgtgaacatggaagagtaccaactgctgaccaaagcactgcgt
cctctgccagaaaaatttcacggcctgaccgaccaagaaactcgttaccgccaacgttat
gtggacttaatcgttaacgaagaatctcgtcaagccttcgttatgcgttcaaaagtggtt
gctgctatccgtaacttcatgatcaaaaaagagttcatggaagttgaaaccccaatgatg
cacgtgatcccaggcggcgcttctgcccgtccatttatcactcaccacaatgcgctggac
atgccaatgtacctgcgtatcgcgccagagttatacctcaagcgtttagtggtcggtggt
tttgagcgtgtgttcgaaatcaaccgtaacttccgtaacgaaggtctgtcgccacgccat
aacccagaattcactatgatggaattctatatggcctatgcagactacaaagatctgatg
gacttaaccgaagaactgttaagctctatcgcgattgaactgttaggcagcgcgcaaatg
ccatacggcgagcacactgttgatttcggtggtccatatgcccgtttaagcatgttagaa
gcgattcagaagtacaatcctgacaacgcgactatccaagctatgacttacgagcaagtg
aaagatcttgaattcatgcgtgaactggcgatcagcctaggtatcaagatcgagaagttc
tggacctgtggtcagctattagaagaaatcttcggtgaaactgctgaatggcagttaatg
caaccgactttcatcactggctacccagcggatatttcgccactggcacgtcgtaacgat
gacaatcacttcatcaccgaccgttttgaattcttcatcggtggccgtgaagtggctaac
ggtttcagcgagttaaacgatgctgaagaccaagacagccgctttaaggcgcaggttgat
gcgaaagacgcgggtgacgacgaagccatgttctacgatgcagactacatcactgcactg
gaacacggtttaccaccaacagcgggtcaaggtatcggtatcgaccgtttagtgatgcta
ttcactaacactcatactatccgtgacgtgatcctgttccctgcgatgcgccctcaagcc
taa
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