Shewanella decolorationis: D0436_17895
Help
Entry
D0436_17895 CDS
T09167
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00630
Glyoxylate and dicarboxylate metabolism
sdeo00680
Methane metabolism
sdeo01100
Metabolic pathways
sdeo01120
Microbial metabolism in diverse environments
sdeo01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D0436_17895 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
D0436_17895 (fdhF)
Enzymes [BR:
sdeo01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
D0436_17895 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
Pyr_redox_3
NAD_binding_8
Fer4_7
Fer4
DAO
HI0933_like
Fer4_6
Fer4_8
Fer4_9
NAD_binding_7
Thi4
GIDA
FAD_oxidored
Amino_oxidase
FAD_binding_3
Fer4_2
Fer4_10
Fer4_22
FAD_binding_2
AlaDh_PNT_C
Fer4_16
Fer4_21
Lys_Orn_oxgnase
Fer4_15
Shikimate_DH
Fer4_18
Fer4_Nqo3
NADH-G_4Fe-4S_3
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
QDZ92175
UniProt:
A0A5B8R0N3
LinkDB
All DBs
Position
3911895..3916193
Genome browser
AA seq
1432 aa
AA seq
DB search
MIELNIDNHSVTAEPSETLLQAARKAGIAIPSLCEPTDATRQLGAAHNANKQDCNLCLVQ
IENTDASLRCVKACETPAEAGMKVITQSAYLTKQRQAALSTILTDHFADCEAPCQQACPA
GVDVQSYLYHIAQGDHTQAIKVIKDTLPLPLSIGRVCPAFCETECRRGLVDDPIAIRQLK
RHAADLDLADDEQGGSYQPPRLADTGKKIAIIGAGPAGLSAGYYLSNQGHHVEIFEAMPK
AGGWLRYGIPEYRLPKAILDKEIELLCRNGLTIHTDTRLGHEIHLAQLVADFDAVCLAIG
AQKAVPMNYKGSTLAGCYLGVDFLKDHCLDKQLKLGKKVAVIGGGNTAIDCARTAVREGC
DVTLIYRRTRAEMPAEAYEVHEAEVEGVKFHFLTNPIENHSDANGQVEAVTFSKMALGEA
DASGRRAPVDTGETFTEAFDTVIAAVSQAPDLSFMQDPLGQLSHGELALSRWNTLIGCEQ
TMSSGVEKLFVMGDARRGPATAVAAIGDGRKAAIAIDKMLKIGLSCDLHAHEFNSVKTIP
SALIPNALKQTETSSKAGSTLYPHTPRQPRLKMPELTALQRLLNYSEVELGFPVDAAMQE
AARCLECACQANTDCKLRDYATDYGVEAKSLATENARHFSVDKSAPFIQFDANRCISCGK
CVDVCQQQSGHCAIQFSQDSYQALPQEMTQHMERRAPRVGFSVSMADSQCVQCGNCVQVC
PTGALVDARDKRQGDSTELKTASTICTYCGVGCRLDLKIDPNANRIRHIEGNKDSVVNQG
MLCVKGRFGFDFIHSDKRLTTPLIRKNGELQPTSWPEAIAYVAKRLTEIKQKDGSNALAS
LASAKATNEDNFVLQKFVRSVLGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDIPSIKD
SDVIFILGSDTTCAHPIIASKIQQAVMQHGARLLVADPKRVGIAEKAELYVAHRPGTDVM
LLNAIMAEIIRNDWQDKAYIAQRTEGIEALYAELAKQDYSLENAALITGVKAEDIARLAR
TIGTAQKTAVYYAMGITQHTTGHDNVTAISNLQLLCGNIGVSGAGINPLRGQSNVQGACD
MGALPNYFTGYQKVTDIHARMRFENHWQTPLSGEIGVTATHMMHDIAKGKIKALYVMGEN
PVLSDPDQAHVLNALSKIEFLVVQDIFLTETAELAHVVLPAAAFVEKRGHFTNTERRVQR
LEQALASPGEALPDWQIVQAVANAMGAGWDYANEEAIWHEINELTPQYRGIRWDRLSVDA
DGKISQGIQWPCPDETHPGTPIMHQSQFTRGLGLFTPVSYRLPAEMPCNEYPLTLSTGRL
LEQFHTGTLTRKTPGLDLLGAPKVMISVYDAEQLGINNGDKLRLTTRRGEIEIDAFVTKR
AQAGVLFLPFHFVEAAANKLTINALDPVAYIPEYKVCAVRAEKVTANINETA
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttaacatcgacaatcacagcgtcacggccgagccgagcgaaaccctacta
caggcggcccgtaaggcgggcattgccattccgagtctgtgcgaaccaacggatgcgaca
cggcaattgggcgcagctcataacgccaataaacaggactgcaacctctgcctagtgcaa
atcgaaaacaccgatgccagcctgcgctgtgttaaagcctgtgaaacgcccgccgaagcg
ggcatgaaggtcatcacccaatcggcatatttaaccaaacagcgccaagccgcactgagc
acgattttaactgaccactttgccgattgtgaggcgccctgccagcaagcctgccccgcg
ggcgtcgatgtgcaaagttacctgtaccacattgcccaaggtgaccatacccaagcgatt
aaagtcattaaagacaccctgccgctgccgctgtcgattggccgagtctgccccgcattt
tgcgagactgaatgccgccgcggcctcgtcgatgaccccattgccattcgccaacttaag
cgtcacgctgccgatttagacttggccgacgatgaacaaggcggcagttatcaaccaccc
cgcctcgcagatacgggtaagaaaattgccattattggcgcgggccccgcaggcttaagt
gccggttattacctgtcaaaccaagggcatcatgttgagatttttgaagctatgcccaag
gcgggcggctggctgcgctatgggatccccgaataccgtttacctaaggcgattctcgat
aaagaaatcgagctgctatgccgcaatgggttaaccattcatacagatactcgcctcggc
catgaaattcatttagcccagctggttgccgatttcgatgcagtgtgcctcgccatcggc
gcccaaaaggcggtgccgatgaactacaaaggctcaacgcttgcgggctgttaccttggg
gtggattttcttaaggatcattgcctcgacaaacaattgaagttgggcaaaaaagtcgcc
gtgattggtggcggcaacaccgccatcgactgcgcccgcaccgccgtgcgcgaaggctgc
gatgtcaccttaatctatcgccgtacccgcgccgaaatgcccgccgaagcctacgaagtg
cacgaggccgaagttgaaggcgtcaaattccacttcttaaccaatcccattgaaaatcat
agcgatgccaatggacaggtagaagctgtcaccttcagcaaaatggcgctcggcgaagcc
gatgcctcgggcagacgcgcgcccgtggacacgggggaaacctttaccgaggccttcgat
accgttatcgccgccgtctcccaagcgccagatctgagttttatgcaggatcctttaggg
caactcagccatggcgaactggcgctgagccgctggaacaccctgataggctgcgagcaa
accatgtcatcgggggtagaaaaactgtttgtgatgggcgatgcccgccgcggcccagcg
actgccgtcgccgcgattggcgatggccgtaaagcggccatcgctattgataagatgcta
aaaattggccttagctgcgatttacatgcccatgagtttaactcggtcaaaaccattcca
agcgccctcattccaaacgcccttaagcaaaccgaaacaagctcaaaagcagggtcgacg
ctttatccccatacgccgcgtcagccccgcttgaagatgcccgaactcacggcgctgcaa
cgactactgaattacagtgaagtcgagttaggctttcccgtagatgccgccatgcaagag
gcggcgcgctgtctcgagtgcgcctgtcaggccaataccgactgtaagctgagagattac
gctacggattatggtgtcgaggccaaaagcttagccactgaaaatgcacggcatttcagt
gttgataagagtgcgccctttattcaattcgatgccaatcgctgtattagctgcggtaag
tgcgtcgatgtgtgtcagcagcagagtggccactgcgccatccaatttagtcaagattcc
tatcaggcactgccgcaggaaatgactcaacacatggagcgccgcgcgccgagagtcggc
tttagtgtgagcatggccgatagccagtgtgtgcaatgtggtaactgtgtacaggtttgt
ccgacgggtgcactggtcgatgcccgagataaacgccaaggggatagtacagagttaaaa
accgcctcaacgatttgtacttactgcggcgtgggctgtcgtctagaccttaaaatcgac
cccaacgccaatcgcatccgccatatcgaaggcaataaggactcggtcgttaaccaaggc
atgctgtgcgttaagggacgttttggctttgattttattcacagcgacaaacgcctcact
acgccactgatccgtaaaaacggcgagctacaaccgactagctggcccgaagccatcgcc
tatgtggcaaaacgcttaaccgagataaaacaaaaagatggcagcaatgccctcgccagt
ctcgcctcggccaaggcaaccaacgaagataactttgtgctgcaaaagtttgtccgcagc
gttcttggcaccaacaatattgatcactgcgcccgcctctgccactcatcgacggtaacg
ggcttgcagcagagtattggtagcggcgccatgaccaatgacattccgagcatcaaggac
tcggacgtcatctttatcttaggttcagataccacctgcgcccatccgattatcgcctca
aaaatccagcaagcggtgatgcaacacggcgcgcgtttactggtcgccgatcctaaacgc
gttggcattgccgaaaaagccgagctgtatgtcgctcacagaccgggcacggatgtgatg
ctgctcaacgccattatggcggaaattattcgcaacgattggcaggataaagcctatatc
gcccagcgcaccgaaggtattgaggccctctatgcagagttagccaagcaggattattcc
ctcgaaaatgcagcgcttatcacgggcgtaaaggccgaagacattgcccgcctcgcgcgt
accattggcacagcgcaaaaaacagcggtttactacgccatgggcatcacccagcatacg
acggggcacgataacgtcaccgccatctctaatttgcagctactttgcggcaatattggt
gtatcaggcgcggggatcaacccactgcgcggtcagagtaatgtgcagggcgcctgcgat
atgggcgcgctgcccaactattttaccggttaccaaaaggtcacggatattcatgccaga
atgcgtttcgaaaaccactggcaaacgccgttatcgggggaaattggcgtcaccgccact
catatgatgcacgatattgccaagggcaaaattaaggccttatatgtgatgggggagaat
cccgtgctcagcgatcccgaccaagcccatgtacttaatgccttgagcaaaattgagttt
ctggtggtacaggatatctttttaaccgagacggccgagcttgcccatgtggtattaccc
gccgctgcttttgtggaaaaacgcggccactttaccaataccgaacgccgagtacagcga
ctcgaacaagcactcgcctctccgggtgaagccttacccgattggcagatagtgcaagcc
gtcgctaacgccatgggcgcaggctgggactatgccaacgaggaagccatctggcacgag
atcaacgagctcactccgcaatatcgcggcattcgttgggacagattaagtgtcgatgca
gatggtaagatttctcaaggtattcaatggccttgtccagatgaaacccatcccggaaca
ccgattatgcatcagagccaattcactcgaggcttaggcttatttacgcctgtcagttat
cgcctacctgctgaaatgccctgcaacgagtatccactgacgctctcgacggggcgttta
ttggagcaattccacacgggcaccttaacgcgcaaaacgcccgggctggacttacttggt
gcacctaaagtgatgatttctgtctatgatgcagagcaactcgggataaacaatggcgat
aaacttcgcctcaccacccgccgcggcgagattgagatagatgcctttgtgactaaacgc
gcgcaagccggtgtactgttcctgccgttccattttgtcgaggccgccgcgaataaactt
acaatcaatgccttagatcctgtggcttatattcccgaatataaggtctgtgcagtcagg
gctgaaaaggtgactgcgaacattaatgaaacagcttaa
DBGET
integrated database retrieval system
