Shewanella decolorationis: D0436_18820 Help Entry D0436_18820       CDS       T09167                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism sdeo  Shewanella decolorationis Pathway sdeo02020   Two-component system sdeo02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:sdeo00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     D0436_18820  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     D0436_18820  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sdeo03021]     D0436_18820 Transcription machinery [BR:sdeo03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      D0436_18820 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Motif Other DBs NCBI-ProteinID:  QDZ92341 UniProt:  A0A5B8R3J5 LinkDB All DBs Position 4118613..4120088 Genome browser AA seq 491 aa AA seqDB search MKASLQLKLGQQLTMTPQLQQAIRLLQLSSLELQQEIQQALDSNPLLELEEEQFDAPSER NQDIADTDFSETTAQPQEQDNSTVDIAESLTKESLPEELPMDTTWDEVFTASPNSGSGAN REDDMPFQGETSEGLYEHLEWQKNLTPFSETDLAIATAIIDAIDDQGYLTQSTEDILEAM GNPEIELDEVEAVLKRIQHFDPVGVAARDLSECLLIQLSHFSPDTPHLENARMLIKDHLD LIAARDFRLLMRKTKLKEDELRDSIALIQTLNPRPGLLITPVDEEYVIPDVSVSKKNGRW VVELNPDCMPKINVNQQYAAMARSSKNQADSQFIRGHLQEAKWFIKSLESRNETLLKVAN CIVQYQQGFFEYGEEAMKPMVLNDIAEAVEMHESTISRVTTQKYMHTPKGLFELKYFFSS HVGTDDGGECSSTAIRAFIKKLVAAENQKKPLSDSKMAQLLAEQGINVARRTIAKYREAM LIPPSNQRKSL NT seq 1476 nt NT seq  +upstreamnt  +downstreamnt atgaaagcgtcactccagctcaaactgggtcaacagttaaccatgacgccacaactccaa caggccattcgtctgttgcaactgtcgtcattggaactgcagcaagagatccagcaagcc ttagactctaatcctcttctcgagctggaagaggagcaattcgacgcgcctagcgaacgt aatcaagatatcgccgataccgactttagcgaaacgacggctcagccacaggaacaagac aattccaccgtggacattgccgagtcgctgaccaaagaatccttgcccgaagaactgccc atggacaccacttgggatgaagtctttaccgcatcgccaaactcaggttcaggcgccaac cgtgaagatgacatgcccttccaaggggaaaccagtgaaggcctgtacgaacatttagaa tggcagaaaaacctcacgcccttctctgaaaccgatttagctatcgccaccgcgattatt gatgccatcgacgatcaaggttatctcactcaaagtactgaagatatcctcgaagccatg ggcaatcccgaaatagaactggatgaagtcgaagccgtactcaagcgtattcaacacttc gatcccgtcggtgtcgccgcaagggatttaagcgaatgtctgcttatccaactctcccac ttttcaccggatactccacacctcgaaaacgcccgcatgctgatcaaagatcatttagat ctgatcgctgcccgcgattttaggttgttgatgcgtaagaccaaactcaaagaggacgag ttaagggacagcatagcgctgatccaaaccttaaaccctcgcccaggcttactcatcact cctgttgatgaagaatatgtcatccccgatgtatcggtgtcgaagaaaaatggccgctgg gtggtcgagttaaatcctgactgcatgccaaaaatcaatgttaatcagcaatatgcagcc atggcgcgtagctcaaaaaatcaagcagatagccaatttattcgtggtcatttgcaagaa gccaagtggtttatcaaaagccttgaaagccgtaacgaaacgctgctcaaggtggcaaac tgcatagtgcaatatcaacaaggtttcttcgaatacggtgaagaagccatgaaacctatg gtcctaaacgatatcgctgaagcggtagagatgcatgagtccaccatttcacgggtgacc acacaaaaatacatgcataccccaaaaggactttttgaactaaaatatttcttctcaagc cacgtcgggactgatgatggcggtgagtgctcatccacagcaatcagagccttcattaag aaactggttgcagcggaaaaccagaaaaaaccattaagcgacagcaagatggcacaactt ctggcagaacagggaattaacgttgcgcgcagaaccattgcgaagtacagagaagcgatg cttattcccccttccaatcagcgtaaaagtttatag

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