Shewanella decolorationis: D0436_19090
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Entry
D0436_19090 CDS
T09167
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo03030
DNA replication
sdeo03430
Mismatch repair
sdeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0436_19090 (ssb)
03430 Mismatch repair
D0436_19090 (ssb)
03440 Homologous recombination
D0436_19090 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdeo03032
]
D0436_19090 (ssb)
03400 DNA repair and recombination proteins [BR:
sdeo03400
]
D0436_19090 (ssb)
03029 Mitochondrial biogenesis [BR:
sdeo03029
]
D0436_19090 (ssb)
DNA replication proteins [BR:
sdeo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
D0436_19090 (ssb)
DNA repair and recombination proteins [BR:
sdeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
D0436_19090 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
D0436_19090 (ssb)
Mitochondrial biogenesis [BR:
sdeo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
D0436_19090 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
Lin-8
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QDZ92389
UniProt:
A0A5B8R2A8
LinkDB
All DBs
Position
complement(4186937..4187641)
Genome browser
AA seq
234 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQERTEWHRVVLF
GKLAEITGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYSTEVVIDQSGSMQMLGGRNQGQG
QGAPMGGMQQNAGYQAAPAQTAPAQNQYAPAQQSYQAPAPQPQSGYNQQPAQQSYGQQQS
HAQQHAQPQQGGYAPKPAAPAYQAPAAPAQRPAPQPQQNFTPDLDDGWDDDIPF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgttaacaaggtaattttggttggcaatttgggacaagatccagaa
gtacgttacatgccaaacggtaacgcagtcgctaacatcacagtagcgaccagcgaatcg
tggaaagaccaacaaggtcaacagcaagagcgtactgaatggcaccgtgtggttctgttt
ggcaagttggctgaaattacgggtgagtatctgcgtaaaggttcacaggtttacctcgaa
ggtaaactgcaaacccgtaagtggaaagaccaaagcggtcaagatcgttacagcactgaa
gtggttatcgaccaaagcggtagcatgcaaatgttaggtggccgcaaccaaggtcaaggc
caaggtgctcctatgggtggcatgcaacaaaacgcgggttaccaagcggctccggctcaa
actgcgccagcgcaaaatcaatacgcgcccgcacagcaaagttaccaagcacctgcaccg
cagccacaatctggctacaatcagcagcctgctcagcaaagctatggccagcagcaatcc
catgcgcagcaacatgctcagccacagcaaggtggttatgcgcctaagcctgctgcacca
gcgtatcaagcgccagcggcacctgcacaacgtccagcgccacaaccacaacaaaacttc
accccagatttggatgatggttgggacgacgatatcccgttctaa
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