Shewanella decolorationis: D0436_19865
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Entry
D0436_19865 CDS
T09167
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdeo03400
]
D0436_19865
Enzymes [BR:
sdeo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
D0436_19865
DNA repair and recombination proteins [BR:
sdeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
D0436_19865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
QDZ92536
UniProt:
A0A5B8R356
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All DBs
Position
complement(671238..672803)
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AA seq
521 aa
AA seq
DB search
MQLRQQLQHFHTVRLILGDQLNAQHTWYQQVDPKVLYLIAELHQENTYVTHHVQKICAFF
GAMAQFASELGAAGHQVRYLTLDETQDFADLNALLQHYVAETGAIKFEYQRPDEYRLLAQ
LSQLKLANAVVNCVDTEHFLFPFDEIDREFPQGQHRLMEHFYRRMRKKFNILMTDGKPVG
GQWNFDASNRQKLKSQDIKSLPTPLMFGHNVEAILERLQRHGINTMGKADTHLLWPINRI
QSLELLQYFCEYCLPAFGRFQDAMTQQHPAQWSLYHSRLSFSLNAKLISPLEVINAVIEH
YHATPFIEIAQVEGFVRQILGWREYVRGIYWANMPSYANINALEATRKLPDYFWHGKTRM
NCLRHALSQSLDYAYAHHIQRLMVIGNFCLLTEIAPDEVDKWYLGVYVDAIEWVEMPNTR
GMALFADGGIVGTKPYAASGSYINKMSDYCGSCHYKIKERSGALACPLNSLYWRFMDKHR
TQLSHNPRIAMLYRTWDKTDEAAKQAILATAEQHLAQLERL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcaattacggcagcaattacagcacttccatacggttaggctgattttaggcgatcag
cttaatgcccagcatacttggtatcagcaagtcgatcccaaggtgctgtatttaatcgca
gaattgcatcaagaaaacacctatgtgacgcaccatgtacaaaagatttgcgcgttcttt
ggtgccatggcgcagtttgccagcgagcttggcgcggcggggcatcaagtgcgttacctc
accctcgacgaaacccaagactttgccgatcttaatgccttactccaacactatgttgcc
gaaacaggggcgattaagtttgaatatcaacggcctgacgaatatagactcctcgcgcaa
ttaagccagttgaagttggccaatgccgtggtgaattgcgtcgataccgagcacttttta
ttcccctttgacgaaattgatagggagtttccacaaggacagcatagactgatggagcat
ttttatcggcgaatgcgcaaaaaattcaatatcttaatgacagatggcaagcccgttggc
ggtcagtggaactttgatgcgagcaacaggcaaaagcttaaatcccaagatattaaatcg
ctcccaacccccttgatgtttggccacaatgtggaagctattctcgagcgtcttcaacgc
catgggattaatactatgggcaaggcggatacgcatttactctggccgataaaccgcata
caaagcctcgaattacttcagtatttttgtgaatactgcctgcccgcctttggtcggttt
caagatgcaatgacccagcaacatccagcgcagtggagcctgtatcacagtcggctgtcc
tttagcctaaacgccaaattaatcagcccattagaagtaatcaatgcggtgattgagcac
tatcatgccaccccttttattgagatagcccaagtcgaaggctttgttcggcaaatcctc
ggctggcgtgaatatgtacgcggtatctattgggccaatatgcccagctacgccaacatt
aatgccctcgaggccacgcgcaagctgcccgactacttttggcatggcaagactcgaatg
aattgcctgcgccatgccttatctcagtcactcgattatgcctatgcccatcatattcaa
cgcttaatggtgattggtaacttttgtctattgaccgaaatagcccccgatgaggtggat
aagtggtacttaggcgtgtatgtggatgcgattgagtgggtcgaaatgcccaatactcgc
ggcatggcgctattcgccgatggcggtatcgtcggcactaaaccctatgctgcgagcggc
agttatatcaataaaatgagtgattactgcggcagttgtcattacaagataaaagaacgc
agcggcgcactcgcctgcccgttaaacagcctatattggcgctttatggataaacaccgc
acacaactctcccacaatccacgcatcgccatgctgtatcgcacttgggataaaaccgat
gaggcagcaaagcaggccattctggcaacggccgaacaacatctcgcgcaacttgaacgc
ctatag
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