Shewanella decolorationis: D0436_20030
Help
Entry
D0436_20030 CDS
T09167
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00860
Porphyrin metabolism
sdeo01100
Metabolic pathways
sdeo01110
Biosynthesis of secondary metabolites
sdeo01120
Microbial metabolism in diverse environments
sdeo01240
Biosynthesis of cofactors
Module
sdeo_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
D0436_20030 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdeo04147
]
D0436_20030 (hemB)
Enzymes [BR:
sdeo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
D0436_20030 (hemB)
Exosome [BR:
sdeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
D0436_20030 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QDZ92568
UniProt:
A0A5B8R337
LinkDB
All DBs
Position
complement(639648..640658)
Genome browser
AA seq
336 aa
AA seq
DB search
MNIITSAFPQRRMRRMRKHDFSRRLMAENHLTVNDLIYPMFVLEGTNRSEKVASMPGVER
YSIDLLLKEAEELVELGIPLIALFPVTPAEKKSLMAEEAYNAEALVQRAVRELKKAFPQL
GIMTDVALDPFTTHGQDGIIDETGYILNDITTEILVKQALSHAEAGADIVAPSDMMDGRI
GAIRQALEAAGHVNTQIMAYSAKYSSSYYGPFRDAVGSAGNLKGGNKHSYQMDPANSDEA
LHEVALDIQEGADMVMVKPGMPYLDIVHRVKTELAVPTFAYQVSGEYAMHMAAIQNGWLA
EKAIVMESLLCFKRAGADGILTYFAKRAAQWLKEAK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgaacatcattaccagtgccttccctcagcgcagaatgcgccgcatgcgtaaacatgac
tttagccgtcgcctgatggctgaaaaccatctaactgtcaatgacttgatctatcccatg
tttgtgcttgaaggcaccaatcgcagtgaaaaagtcgcctctatgccaggagttgagcgc
tactctatcgacttactgttaaaagaagccgaagagctagtcgaactcggtattccgtta
attgccctgttccctgttacgccagcagagaagaaatcgctgatggcagaagaagcctac
aatgccgaagctttagtgcaacgcgccgtacgtgaactgaaaaaggccttcccacagctg
ggtatcatgactgacgtagccttagatcctttcaccacccacggccaagacggcattatc
gatgaaacaggctacatcctgaatgacatcaccacagagatcttagtgaaacaagcccta
tcccacgccgaagcgggcgcagatattgttgccccatcggacatgatggatggtcgtatt
ggtgcgattcgccaagcgctggaagccgcaggccatgtaaacactcaaatcatggcctat
tcagccaaatactcctcaagctactacggcccattccgcgatgccgtcggctcagcaggc
aacctaaaaggtggcaataagcatagctatcaaatggatccggccaatagcgatgaagct
ctgcatgaagttgcgctagatatccaagaaggcgcagatatggtaatggtgaaacccggt
atgccttacctagatatcgttcaccgcgtaaaaaccgaattagccgtacccactttcgct
taccaagtgagtggtgaatatgccatgcatatggcggccattcaaaatggttggttagcg
gaaaaggccatcgtcatggaatcgctgctatgcttcaaacgcgctggtgccgatggcatc
ctaacctactttgccaaacgtgcagcacagtggctaaaagaagctaaataa
DBGET
integrated database retrieval system
