Shewanella decolorationis: D0436_20115
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Entry
D0436_20115 CDS
T09167
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00470
D-Amino acid metabolism
sdeo00550
Peptidoglycan biosynthesis
sdeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D0436_20115 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D0436_20115 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdeo01011
]
D0436_20115 (murD)
Enzymes [BR:
sdeo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
D0436_20115 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdeo01011
]
Precursor biosynthesis
Amino acid ligase
D0436_20115 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
KR
Shikimate_DH
NAD_kinase
MeaB
Motif
Other DBs
NCBI-ProteinID:
QDZ92579
UniProt:
A0A5B8R2T7
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All DBs
Position
612120..613439
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AA seq
439 aa
AA seq
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MQSQYSHIVLGLGATGLSVVRYLCGKGIKPLVMDSRRQPPGADTLASAFPEVQLIAGGFD
CRYLVQAKQIIISPGIAIDTPEVRAALDMGIEVIGDVELFAREIADRKPCVIGITGSNGK
STVTTLVGEMLREAGMAVAVGGNIGIPALDLLTENADIFVLELSSFQLETTHSLNCVAST
CLNVTEDHMDRYSDMDAYRKAKLRLYHQSRSIIFNRDDALTIPTEPMNQNSFGLAPPEGD
EWGICDSKIYHGHSEIMPITEVSLIGSHNHANLLAAMALVYAVGVDKQVMAKVARTFTGL
SHRCEVVGVKAGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGKGADFSPLVEP
LTKVTHLITLGRDGNKIAALKEGAIKVDSMAAAVAKAAELATSGDIVLLSPACASLDMYS
NFMARGDDFRSQVEQLDGE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtcagtattcacacatagtgttaggtttgggtgccaccgggctctcggtagtg
cgctatttgtgtggaaaaggcattaagcccttggtgatggatagccgtcgccaacctccc
ggtgcggacacccttgccagtgcattccctgaggtgcagctgattgccggcggattcgat
tgccgttacttagtgcaagcaaagcaaatcattatcagcccaggcattgcgattgatacg
cccgaggtgcgcgcggctctggatatggggattgaagtcattggcgatgtggagctattt
gcccgtgagattgccgaccgtaagccttgtgtgattgggattactggctcaaacggcaag
tcgaccgtcaccaccttagtgggtgaaatgctgcgtgaagccggcatggcggtggccgtg
gggggcaacattggcattccggcgctcgatctgctgacggaaaatgccgatatttttgtg
cttgagttatcgagcttccagctcgaaaccacccacagcttgaattgcgtagcgtcgacc
tgtttgaacgtgaccgaagaccatatggacagatacagcgatatggatgcctatcgcaag
gccaagctgcgtctgtaccatcaaagccgctccattatctttaaccgtgatgatgcgctg
actatcccgactgagccgatgaaccaaaacagtttcggtttagcgccgcccgagggtgat
gagtggggcatttgtgatagcaagatttaccacggtcacagtgaaattatgccgatcacc
gaagtatcgctgattggtagtcataaccatgccaacttacttgctgccatggcgctggtg
tatgccgtgggtgtagataagcaagtgatggccaaagtggctcgtacttttactggtctt
tctcatcgctgtgaagtggtcggtgtgaaagcgggcgtgacctatgtgaacgactctaag
gcgaccaatgttggcgccaccgtcgcggcgctcgatgggttaagcgatcacttaggtgac
attattttgattgccggtggtgatggtaagggcgcggatttcagtccattggtcgagccg
ttaacgaaagtgacacacctcatcaccttaggtcgcgatggtaataagatagccgcattg
aaggaaggagccatcaaggtggactctatggctgctgcagtggctaaggccgccgagtta
gccacctcgggcgatatcgtactcctatcgccagcctgtgcgagcctagatatgtacagc
aactttatggctcgtggggatgattttagaagccaagtggagcaactcgatggcgagtga
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