Shewanella decolorationis: D0436_20125
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Entry
D0436_20125 CDS
T09167
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00300
Lysine biosynthesis
sdeo00550
Peptidoglycan biosynthesis
sdeo01100
Metabolic pathways
sdeo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D0436_20125 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D0436_20125 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
D0436_20125 (murF)
Enzymes [BR:
sdeo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
D0436_20125 (murF)
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Glyco_hydro_42C
Beta-tre_PLH30
Motif
Other DBs
NCBI-ProteinID:
QDZ92581
UniProt:
A0A5B8R4C7
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All DBs
Position
609648..611030
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AA seq
460 aa
AA seq
DB search
MIPISLEALSQHLSAHRVGDDVTIQALSSDSRKIGPATLFVALKGERFDGHDFAAMAIEN
GAVALMVERQLAFDVPQLIVADCQKAMGAIGAYVRDQVDPICVALTGSNGKTSVKEMIAT
ILSAKHQVLYTAGNFNNEIGVPLTLLRLTPEDKYGVFELGANHKGEIDYTSSLVRPHVAL
VNNVGSAHLEGFGSQAGVAQAKSEIYNHLQPDGTAIINADDAFADVMRVKAKHYKQLSFS
QQEGAAKRQIDVIATGHKANSDGCYRFILNYAGESCEVTLPLAGRHQVSNALAAASVCIA
LGLSLKEIAEGLSQLTPVKGRMQPTQLGRVRLIDDSYNANPVSVGAAIAWLKEISENRCL
VLGDLGELGDNAPLLHAELGQLAKQQGIDALFCTGTLTQHTSQAFGAEHHDSVATLVEKL
IKHINQLPGQVTVLVKGSRSAAMERVVDGLTVAFGRGELV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaatttccctcgaggcgctgagccaacacttaagtgcgcatcgagtcggtgac
gatgtcaccatccaagcattaagcagcgatagccgtaaaataggccctgcgaccctgttt
gtcgccttaaagggcgagcgtttcgacggtcacgattttgctgccatggcaattgaaaat
ggtgccgttgcactaatggtcgagcgtcaattggccttcgatgtgccgcagcttattgtt
gccgattgccaaaaggccatgggcgcgattggcgcctatgtgcgcgaccaagtagatccc
atttgtgtggccttaaccggctccaatggcaaaaccagcgtgaaagaaatgatcgccacg
attttatcggcgaagcatcaagtgctttatacggctggtaacttcaataatgaaatcggt
gtgccactcactttgctgcgtttaacgcctgaggataagtatggggtgtttgagcttggc
gctaaccataaaggtgagattgattacacctcgagtttggtgcgtcctcacgtagcctta
gtcaataacgttggcagcgcccacttagaaggctttggctcacaggcgggggtcgcccag
gccaaatcggaaatctacaaccatctgcaacctgatggcacggcgattatcaatgccgat
gacgcctttgctgatgtgatgcgtgttaaagccaagcactataagcagttaagcttctct
cagcaggaaggtgcggctaaacggcaaatcgatgtgattgcgactggccataaagccaat
agcgatggttgttaccgctttatccttaattatgcgggtgagtcctgcgaagtgactctg
cccctcgcaggtcgtcatcaagtcagtaacgcgctagctgcggcaagtgtttgtattgct
ttgggattgagcctgaaggaaatcgctgaaggcttgagccagttgacccctgtaaagggg
cgtatgcaaccaactcaattaggccgagtccgtttaatcgatgatagctataacgctaac
cctgtatccgtgggggcggctatcgcttggttaaaggaaatttctgaaaatcgttgtttg
gtactgggagatttgggcgaattaggcgacaatgcgccccttttacacgctgaactggga
caactggcaaagcaacagggcattgatgctctgttctgtaccggcaccttaactcagcac
actagccaagctttcggggcggagcaccatgacagcgtggcgacgttagtagaaaaactc
ataaaacacatcaaccagttgccgggacaggtgacggttttagttaaaggttcacgtagt
gccgcaatggagcgggtcgtggatggcctaacagtagccttcgggcgtggggagttagtg
tag
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