Shewanella decolorationis: D0436_21065
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Entry
D0436_21065 CDS
T09167
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
D0436_21065
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
T2SSK
HHH_6
PsbU
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QDZ92755
UniProt:
A0A5B8R210
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Position
194649..196988
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AA seq
779 aa
AA seq
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MQTIAQIIAQELNVQEHQVTATIDLLDNGATVPFVARYRKEATGGLDDTQLRSLHTRLGY
LRELNDRRQVILSSIQTQGKLTPELQREIEAADSKTRLEDLYLPFKPKRRTKGQIAIEAG
LEPLVEAVLADRNADIEVLAAGYLNLEAGFADTKAVLEGARYILMERYAEDAELLRKVRE
HLSQNSVLESRVIAGKEKEGAKFRDYFEHNEPLAKVPSHRALAMLRGRNEGFLSLSMNAD
PTAEAGQGSYCEVIISEHLGLKLGDSSVDQWLKTVVTATWRIKIALQMETEFISQMRERA
EAEAIKVFARNLGDLLMAAPAGAKATMGLDPGLRTGVKVAVVDNTGKLVAHTTIFPHAPQ
NLWDKSIRTLANLVQMHKVELIAIGNGTASRETDKLAGELIASLKDSQPQLTKVMVSEAG
ASVYSASELAALEFPELDVSIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQSQL
SSSLEAVVEDCVNGVGVDLNMASVPLLSQVAGLNKTLAKNVVDYRDANGAFKNRKDLLKV
PRLGPKAFEQAAGFLRIRDGDNPLDMSAVHPEAYALVETIAKTKQVDVASLIGNSELLRN
IKPQEFTTPEFGLPTVTDILSELDKPGRDPRGEFKTAKFKDGVEELKDLKPEMILEGVVT
NVTNFGAFVDIGVHQDGLVHISSLTDKFITDPHTVVKAGDVVKVKVMEVDVERRRIGLSM
RLDEAIDQSKAQTRGPSQGKPQAHKGNAQHKSARPAPKAAPVNAAMGNAFADAFAKLKK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactattgcccagattattgctcaggaactgaatgttcaggagcatcaagtcact
gccaccatagatttactcgacaatggtgccacagttcccttcgttgcccgttaccgtaaa
gaggcaactggtggtttagatgacacccaattacgttcattacacacccgtttaggttac
ttgcgtgaattgaatgacagacgtcaggtcattttatccagcattcaaactcagggtaag
ttaacgcctgaattacaacgagaaatcgaagctgccgacagtaagacccgcctcgaggat
ctgtatcttcccttcaagcctaagcgccgcactaagggccaaattgcgattgaagcgggt
ttagagccgcttgttgaagctgtgcttgcggatcgcaatgccgatatcgaggtattggcc
gcgggttatctaaatctcgaagcgggttttgccgataccaaagccgtgttggaaggcgcc
cgttatattctgatggagcgttacgccgaagatgcggaattactgcgtaaagttcgcgaa
cacttaagccaaaacagtgtgttagagagccgcgttatcgctggcaaagagaaggaaggc
gcgaagttccgcgactattttgagcacaacgaacctctggcgaaagtgccgtcccaccgc
gccttggcgatgttgcgtggtcgtaatgagggcttcctgtcgttatcgatgaatgccgat
cctacagccgaagcgggtcagggcagttactgcgaagtcattattagcgagcacttaggc
ttaaagctgggcgatagcagtgtcgatcaatggcttaagaccgttgtgactgccacatgg
cggattaaaattgccctgcaaatggaaaccgagtttatctcgcaaatgcgtgaacgcgcc
gaagcggaagccattaaagtatttgcccgtaacttaggtgacttgttaatggccgcacca
gcgggcgccaaggcaaccatggggctagacccaggtcttcgtacgggtgttaaagtcgct
gtggtagataacacgggtaagctggtcgcacacacgactatcttcccccatgcgccacag
aatttatgggacaagtcgattcgtaccctcgccaacctagtgcaaatgcataaggtggag
ttaatcgcgattggtaacggtaccgcctcccgcgaaacggataaattagcgggtgaattg
attgccagccttaaggacagccaaccgcaattgaccaaagtgatggtgagtgaagcgggc
gcttcggtgtattccgcctcagaacttgcggcgttggaattccctgagttggacgtttcg
attcgcggcgcggtctcaattgcccgccgtttacaggatcccttagcggaattggtgaag
attgaacctaagtctattggcgttggccaatatcagcacgatgtgagtcaaagtcagcta
tctagctcgctcgaagccgtggtcgaagactgcgtaaacggtgtgggtgtggatttaaac
atggcgtctgtgcctttgctgtcgcaagttgctggcttaaacaagaccttagcgaaaaac
gtggtcgactaccgtgatgccaacggcgccttcaaaaaccgtaaagatctgctgaaagtg
ccacgcttaggccctaaagcctttgaacaagctgcgggctttttgcggatccgcgatggc
gacaatcccttggatatgtccgcggttcaccccgaagcctatgcgctggtcgaaacgatt
gccaagaccaagcaagttgacgtggcgagccttatcggtaattccgagctgctacgcaat
atcaaaccgcaggagtttacgaccccagagtttggtttaccgacggtgaccgacatcttg
agcgaactggataaacctggccgcgacccccgtggtgagtttaaaaccgccaaatttaag
gatggggttgaggagcttaaggatctgaaacctgagatgatcctcgagggtgttgttacc
aacgtgactaactttggtgcctttgtggatatcggcgtgcatcaagatggtttagtgcat
atctcttcattgaccgacaagtttattaccgatccccataccgtggtgaaagcgggggat
gtagtaaaagtaaaggtgatggaggtcgatgtcgagcgtcgtcgtatcggtttgagtatg
cgtctggatgaggctatcgatcagagcaaggctcaaactcgcggcccatcccaaggtaag
ccacaggctcataagggcaatgcacagcataagtctgcgcgtcctgcgccaaaagcggca
cctgtcaacgcggccatgggcaatgcctttgccgatgccttcgcgaagctgaaaaagtaa
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