Shewanella decolorationis: D0436_21545
Help
Entry
D0436_21545 CDS
T09167
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D0436_21545 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdeo03400
]
D0436_21545 (mutM)
Enzymes [BR:
sdeo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
D0436_21545 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D0436_21545 (mutM)
DNA repair and recombination proteins [BR:
sdeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D0436_21545 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF1631
DUF735
Motif
Other DBs
NCBI-ProteinID:
QDZ92834
UniProt:
A0A5B8R1Z3
LinkDB
All DBs
Position
complement(80703..81518)
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVEVTRQGIAPHLVEQTVVDLVIRNASLRWPVPELAKQIIGQTIRQVRRRAKYLL
IDTDAGTNIVHLGMSGSLRILPHDTPVEKHDHIDLVLANGRILRFNDPRRFGAWLWCQLP
EEAHPLLEKLGPEPLTDAFNVNQLAAALAGKKKAIKLCLMDNHIVVGVGNIYANEALFAA
GIHPEAEAGKIDIERLTVLVAEVKQILAHAIKQGGTTLKDFTNAEGKPGYFAQKLHVYGR
GGETCTQCGNLLSEIRLGQRTTVFCGICQTR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagtcgaagtcacccgtcagggcatagccccacatcttgtcgaa
caaaccgtagttgacctcgtaatccgtaacgcctcactgcgttggcccgttcccgaactt
gccaaacagatcatcggccaaaccatacgccaagtgcgtcgccgcgctaaatatctgtta
atcgataccgatgccggcaccaacatagtgcatttggggatgtcaggcagcttgcggatc
ctgccccatgacacgccagtggagaagcacgaccatatcgatcttgtcctcgccaatggc
cgtattctgcgctttaacgatccgaggcgtttcggcgcttggttatggtgccaactgcct
gaggaagcccatccgctactggaaaaactcgggccagaacctttaaccgacgcctttaac
gtcaatcagttagctgccgcactggcgggcaagaagaaggccatcaaactctgcctgatg
gataaccatattgtggtaggtgtggggaatatttacgccaacgaagccctgtttgccgca
gggatacaccccgaggcggaggcaggcaagatagatattgaacgcttaacggtactggtt
gccgaggtcaaacaaatcctcgcccacgccatcaagcagggcggcactacgcttaaagac
ttcaccaatgccgagggtaaacccggctatttcgcgcaaaagctgcatgtttacggccgc
ggtggcgaaacctgcactcagtgcggcaatctactcagcgaaatccgccttggtcaacgc
accacagtattttgcggcatctgccagacgcgttaa
DBGET
integrated database retrieval system