KEGG   Shewanella decolorationis: D0436_24810
Entry
D0436_24810       CDS       T09167                                 
Name
(GenBank) Y-family DNA polymerase
  KO
K03502  DNA polymerase V
Organism
sdeo  Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:sdeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdeo03400]
    D0436_24810
DNA repair and recombination proteins [BR:sdeo03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    D0436_24810
SSDB
Motif
Pfam: IMS DUF4113 IMS_C IMS_HHH_1 IMS_HHH DUF5855
Other DBs
NCBI-ProteinID: QWY79396
LinkDB
Position
pNi1-3:complement(134159..135406)
AA seq 415 aa
MSSIIALCDGNKFYSSCEQIFNPLYRGKALIVVSNNDGMIVTLSPEAAALGLKKFTPYFQ
VAEFCRANGVVICSSNYALYSTISTQFMRVASRECYSYFPYSIDEIFAEFGNDTPQNLSK
LGRKLRHDVWREVRLPIGVGLGDSLTLAKAANHAAKRLGYRGVCVIKAHNREAILGAMLT
TDVWGVGKRIGQRLSSMGIHTALQLAQMKTKTARKMFGVNIERTVFELNGTKAFSWDDMP
VNKRQIFSTRSVGQRITTIAGLKEALSFHACEAARKLRGQKSVARCLVFFAQTSAYDKHG
VSGFSRTIHLPAPTSDSMIISQQITSAVESCYAAVPYYRVGVGLLDIEPGLQLDMFNDNL
GKPALMSVMDRLNEQMGKGAVFVVANGIEKNWQMRREFLSPSYLTNWNDIPNIKC
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgagcagtattatcgcgctttgcgacgggaataaattttatagctcatgcgaacagatt
tttaaccctctgtatcgtggtaaggcactaatcgtggtctcgaacaatgacgggatgatc
gtgacgttaagcccagaagcggccgcgttgggacttaaaaaattcacgccttactttcaa
gtggccgagttctgtcgggcgaatggggtggtcatttgctcgagcaattatgcgttgtat
tcaacaatcagcacccagttcatgagggtcgcgtcgagagagtgctattcgtattttccc
tattctattgacgaaatttttgctgaatttggcaacgacacaccacaaaacctatcaaaa
ttaggccgtaagctaaggcatgatgtgtggcgcgaggttagattgcctatcggtgtcggg
ctaggggattccttgacgctggcgaaggccgcaaatcatgctgcgaagcgcttaggctat
cgcggtgtttgcgtgattaaagcgcataatcgcgaagccatcttaggggcgatgttgact
accgatgtgtggggggtgggtaaacgaattggtcagcggctaagttcgatggggattcac
acggcgctgcagttggcccagatgaagactaagaccgcgaggaaaatgtttggcgttaac
atcgaaagaacggttttcgagctgaatgggacaaaggcgtttagctgggacgatatgccc
gttaataagcgacagatattctctacacgctcggttggccagcgaataacgacgatagca
gggttaaaggaggcgttgtcattccatgcgtgtgaagcggctcgaaagctaaggggtcaa
aaatcggtagcacgttgcttggtattttttgctcaaacatccgcgtatgacaagcatggt
gttagtggtttcagtcggacaattcatttaccagctcccaccagtgacagcatgatcatc
agtcagcaaattacctctgcggttgagtcatgttatgccgcagtgccgtactatcgcgtt
ggggtagggctattagatatagaaccaggcttgcagctcgatatgttcaacgacaacctg
ggaaaaccagcgttgatgtcagtcatggacagattaaacgagcaaatgggcaaaggtgcc
gtgttcgtcgtcgccaatggcattgagaaaaattggcagatgcgccgtgagtttttgagc
ccgtcctatctaaccaactggaatgacatccctaatatcaagtgttag

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