KEGG   Shewanella decolorationis: D0436_25345
Entry
D0436_25345       CDS       T09167                                 
Name
(GenBank) type-F conjugative transfer system secretin TraK
  KO
K12066  conjugal transfer pilus assembly protein TraK
Organism
sdeo  Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:sdeo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sdeo02044]
    D0436_25345
Secretion system [BR:sdeo02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   D0436_25345
SSDB
Motif
Pfam: TraK_C
Other DBs
NCBI-ProteinID: QWY79423
LinkDB
Position
pNi1-3:complement(243773..244990)
AA seq 405 aa
MIAPAFAADDDIYSLPTESVNPQRVPVLGTDFNQAEEKLQAELNSPYANQPLSIDTSKEI
GTQTALSVSPNEQVLYQQPVTQPPSQQPMQQADHQQVPTYGGASPVNPTAISPANAGEVI
SRRDDSMDYLRKQYKSHQVIALKAGGTTTLPISLSTTNRIATSFKNAKITTSVPSDAALV
YGEQGFVYVTPGVNAGAIDLIVEEDGAPETAVSLYLVPLNVPPVLVELTVSYNASQRNAA
LQAVSIYSENEAKELESAKQAERERITNNQPVADSHVDDVMTLLEVVAKAEVPAGYELLE
GDTIPAEVRYPCDIRQMLPLYHEVKQRLIGSKLVVDIMEVRNDVNGLRSFRDEACMGPRR
EDVMAVGVLDKATLGPRESTEVYILRDRSYFERQMKVPRRSRVGG
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgatcgctcctgcttttgcggctgacgatgacatttattcgttaccgactgaatcggtg
aatccgcaacgagtacctgttttgggtactgatttcaatcaagcagaagaaaagctacag
gctgaattaaacagcccttatgcgaatcaacctctgtccatcgatacgagcaaagaaatt
ggtacccaaactgcattatcggtttcgcccaatgaacaagtgctctatcaacagccagtg
acccagccgccatcgcagcaaccgatgcaacaagcagatcatcaacaagtccccacttac
ggcggcgcgagccctgttaatccgacggcgatctcccctgccaatgccggagaagtcatt
agccgtcgtgatgactcaatggactacttacgcaagcagtacaaaagtcatcaagtgatt
gcattgaaagccggtggcacaacgacattgccaatttcgctgtcaaccactaaccgaatc
gcgacctctttcaaaaacgccaaaataaccacgtcagtaccgagtgatgcggcgctggtt
tacggtgagcaaggttttgtgtacgtcacacctggcgttaacgctggcgcgattgacttg
atagttgaagaagatggcgcaccagagaccgcagtatcactctacttggtgccattaaac
gtcccgccagtgctcgtggagttaaccgttagctataacgcgagtcaacgcaatgcagct
ttgcaagccgtgtctatctacagcgagaacgaagctaaggagctggaatcggcaaaacaa
gcagagcgtgagcgtattactaataaccaacccgtcgctgacagccatgttgacgatgta
atgacattactggaagttgtggctaaagccgaagttccggcaggttacgaactgcttgaa
ggtgacaccattccggcggaagtgcgttacccgtgcgatattcgccaaatgctccccctt
taccatgaagtgaaacaacgcttaattggctccaaattggtcgttgacatcatggaggtc
agaaacgatgtcaatggcttacgttcattccgcgacgaggcctgcatggggcctcgtcgt
gaagatgtgatggccgttggtgtgttagataaagcgacattaggcccaagggaaagcacc
gaagtgtacattctgcgtgaccgcagctacttcgagcgccaaatgaaagttccacgtcgt
agtcgtgtaggaggttaa

DBGET integrated database retrieval system