Shewanella decolorationis: D0436_25505
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Entry
D0436_25505 CDS
T09167
Name
(GenBank) conjugal transfer protein TraG N-terminal domain-containing protein
Organism
sdeo
Shewanella decolorationis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TraG_N
Motif
Other DBs
NCBI-ProteinID:
QWY79286
UniProt:
A0A8F3ILN0
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All DBs
Position
pNi1-3:275020..280302
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AA seq
1760 aa
AA seq
DB search
MLTIYSLGDLDLLIKMAQSAELAFSDGGIANSNLIAIGLGITLLVSAFKQIFAPDKFHVK
EFFIALFTYMFLFTPKVDFYVESVRTGEVSQSFTLPFGIVAPAALATMIGGGFAQGMSEA
YASITPDYDTEPGTNIDPLKALLKARFVGTSEADASYRSVGENLGAYIKNCYFEDIRNGK
NPTGQAVQEVNHDESVTGAFDFTKLKVTSGSWYTPYYDVNTKSYTKITCTDAYAKLGNDL
SDSSPWAEEMKGRAAIMYNMAEESQVEKVFESLTGDTANLINLYRANFVKAMMAKVGASY
VELEPSERLAFQQEFDAIQQRHLSQAAQSSFFLETAPALITWFECFIFLIAPLLPVFLTF
GSKGIMMAGKLYSFLLAVNFWPIIQVGVNMYTNHYFNKLMCSLPGNDSSSVQNCMIAPSM
RNWSIDSLGGMDSAYTTLETFVSQAAIIQTMVPALAMMIVFGGVHTMMGATQKAQMGANM
DAKGVSPQTVNSDGKTVSSGGYSQTMTSNGEWMESRQGAGNMAGLSTGGSTYNALSAGAT
ALSKAISDVSSITQSDTAARQAVGAANERLITSVGTGNVFQNGAQAGLGYEETLGFAATS
LIGKGSEHGSSEVRAKILNTLASMNETEANEFATSFGVGLALGHSGSSKTESAKGINPVS
TLLSTLGVNAKADATWSQTQSTIRSQLQSEGETNTSTLTSAEKESVAKAYQEQNTEANRK
TYNSTQVDTSSAVYQDAKSRDEAVSQQRTTGEQLQQAEARSRELRDGVTSSGSAGSSANI
KFGELISTNNSGLFTKTDTLRQIAQNAADGAMRGKYGNDWDAATNGLDTLDFKSTMSALD
AKAAGAGAGTAEEAKLNAMKQDYAANQSLYDVARDNNALQGIVNNSQTLMSANGKPIPLN
DVGSIADRSVGMLSDIMSRTQSDPMMADAVRHLTVGSAIGFAAVNGTESANTTAMAVGDR
FTQIGQSQISDYDKPALTSEQQKFKSDQEAGIGATGQRINKEGQKVEDEAAQRAKDFKPS
KEDYDNQHLESPAKWTPEQQHKLDKLDRNIDDLWKKLEESQKVGGTAGVNNIIDTLGQEL
KSGTFGAVSPKVVDDVMKVMKSAAESPAELSRVLNDFANRQSSYYTGDHASQVAPVIAAM
ANAADGLLGKAIDSGQLSPSEKSVYQNAQQAFGRVNEAYASQDIVDRQSHAGNAAAQVIS
TLGSDKDMKTQKAVALASVIAADGDTKNPLPSAEFSRLQRDGNPSKDEVLDMKLVTDRAQ
DIVTQAMAQEGLSEPVRERLVQTLQGLQDFDQKLSTSRNSDAHTRTGTSYDHATDYDDAT
KNSPVMSGLSSSERIHLMDGFHRIGEGEGSTQSRMENTRFNGQGANMQLESIANKMSPED
KAAILGSLPDSVRANVERGMELTASNSSPSSEKLPIGETQFPLSPVASAQGDAVSQQGAA
PAATAQGDTVSQQGAAPATTAQGDAVSQQGAAPAATAQGDTVSQQGAAPATTAQGDAVSQ
QGAAPAATAQGDTVSQQGAAPATTAQGDTVSQHSAAPAATAQGDTVSQHGAAPATTAQGD
AVSQQGAAPATTAQGDAVSQQGAAPAATAQGDTVSQQGAAPAATAQGDTVSQQGAAPATT
AQGDAVSQQGAAPAATAQGDTVSQQGAAPASTAQGDAVSTASPERSEPEVRYVETPAENS
TQSGSTVVENNPFAFDGNQAGFNFSVLGGFGNNVQPSNVSYNSVDLVGGVAASGHSVAGS
SSSGGPSMDTSNSNVPTMER
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atgttaactatctactctctcggtgacctcgatttattgataaagatggcgcaatcggcg
gaattggcattcagtgatggcggcattgcaaatagcaatcttattgcgattggattgggt
attaccctgctagtgtctgctttcaagcaaatttttgcccctgataaatttcatgtaaag
gagtttttcatcgccttgttcacttacatgtttttgttcaccccgaaggtggatttttac
gttgagtcagtcagaacgggcgaagtgtctcagtcatttactttgccctttgggattgtg
gcgccagctgcattagctacgatgattggtggtggttttgctcaagggatgtcagaagca
tatgccagtataacacctgattatgacaccgagccaggcaccaacatagaccctctaaaa
gcgttacttaaagcccgatttgtcggcacttctgaggcagatgcgagttatcgttctgtc
ggtgaaaatttgggtgcgtacattaaaaactgttatttcgaagacattcggaacggtaaa
aatccgacgggacaggcggtacaggaggtaaatcacgacgagagtgtcactggggcgttt
gacttcactaaattaaaagtcacctcgggaagctggtatacgccttactatgatgttaac
accaagtcatacaccaaaattacctgtaccgatgcttatgccaagttaggcaatgatctc
tctgacagcagtccttgggccgaagaaatgaaggggagagccgccataatgtataacatg
gcagaagagtctcaagttgagaaagtcttcgagtccttaacaggggatactgctaacctc
ataaatttgtatcgagccaactttgtaaaagcaatgatggccaaagttggggctagctat
gtagagttagagccctctgaacgattggcgtttcagcaagaatttgatgcgattcaacag
cgtcacttaagccaagcagcgcagtcttcatttttcttggaaactgcccctgcacttatc
acttggtttgagtgttttattttcctcattgctccgctgcttccggttttcctgaccttc
ggctccaaagggatcatgatggccggaaagctctattcatttctactcgcagtgaacttt
tggccgattatccaagtcggcgtcaacatgtataccaaccactatttcaataagctgatg
tgttctctgccagggaatgattcgagctcggttcagaactgcatgattgcgcctagcatg
cgaaattggagtatcgattctctggggggaatggatagcgcctacaccacacttgagact
tttgtatctcaagcggcaatcattcaaacgatggtgccagcgctggctatgatgattgtc
ttcggcggtgtgcatactatgatgggggcaacacaaaaagcccaaatgggcgccaacatg
gatgccaagggcgtatcaccacagacggtcaatagcgatggtaaaaccgtttcgtcaggt
ggttatagtcagacaatgacatcgaatggtgagtggatggaaagccgtcagggtgccgga
aatatggctgggcttagtacgggggggtcaacctataacgctctatctgcaggggcaact
gcccttagtaaagcaatatctgacgttagcagtattacacaatcggatacagcggcaagg
caagcggttggtgctgctaatgaaaggttaatcacttcggtaggaaccggaaatgtcttc
caaaatggcgctcaagcagggttagggtatgaagaaactcttggtttcgcagcaacttct
ctaataggaaagggaagcgaacatggatctagcgaagtaagagcgaaaatattgaacacc
ttggcgtctatgaatgaaacggaagctaatgagtttgcgacgagttttggggtaggactg
gcgcttggccatagcggaagttcaaaaacagaaagcgctaaaggtattaatccggtatcg
acattgcttagtacgcttggtgttaatgccaaagccgatgctacatggtcgcaaacacaa
tccacaattaggtctcagcttcaatcagagggggaaaccaacacaagcactttaacgtct
gcagagaaagagagcgtcgccaaggcataccaagaacaaaatacggaggcaaaccgcaag
acctacaactcaactcaagtagatacgtcttctgcagtttatcaagatgcaaagtctaga
gatgaagctgtatcacagcagcgaaccacaggcgaacaattgcaacaggcagaggctaga
tctcgtgaattacgtgatggtgttacttcgtcaggttcggctggtagtagtgcgaacatt
aagtttggcgagctgatttctaccaataattcgggattatttactaaaacggatacgtta
cgccaaattgctcagaatgccgctgatggcgcgatgcgaggcaaatatggaaacgattgg
gatgctgctacgaatggcttggatacgctcgactttaaaagcacaatgagtgctttagat
gctaaagccgctggtgctggggctgggacagcagaagaagccaagttgaatgcgatgaaa
caggactatgccgctaatcaatcattatatgacgtggctcgagataataatgctctacag
gggattgttaataattcgcagactcttatgtctgcgaatggaaaaccaattcctctcaat
gatgtaggctcaatagctgaccgatctgtcggtatgttatcggatataatgtcacgtact
caatcagaccctatgatggctgacgcggttcgacatcttaccgtaggttcggctatcgga
tttgccgctgtaaatggaacggaatctgccaacacgacagcgatggctgtaggtgaccga
ttcacacaaattggtcagtcacaaatatcggattacgacaagccagccctaacgagcgag
caacaaaagttcaagtctgatcaagaggcaggtattggagcaacaggtcagcgcattaat
aaagaaggtcaaaaggtagaagatgaggcagcacaaagagctaaggactttaagccttct
aaagaggattacgataatcaacatctagagtcgcctgcaaaatggacacctgaacagcag
cataaacttgataagttagacaggaatattgatgacctttggaagaagttggaagaaagc
caaaaggtcggcggaaccgctggtgtgaacaatattatcgatactttggggcaagagctt
aagtcgggaacttttggtgcggtatcgccaaaggttgttgatgacgttatgaaggtgatg
aaatcagctgcagagtctccagctgaattgtctagggtgctaaatgattttgcgaataga
caatcaagttattacaccggcgatcacgcatctcaagtggcgccagttatcgctgcgatg
gctaacgcggccgatggattactgggtaaggccattgacagtggtcaattgagcccaagc
gagaagtcagtatatcaaaatgcacaacaagcctttggtcgtgtgaacgaagcgtatgct
agtcaagatattgtagatcggcaatcccatgcgggtaatgctgcggctcaagttatttcg
acgttgggctccgacaaggatatgaagactcaaaaagctgttgctctggcatcagtaatt
gcggcagacggtgatactaaaaatccattaccaagcgctgaatttagtcgattgcaaaga
gatggcaatccatctaaagacgaagtgctagatatgaaactcgtaactgatcgtgctcaa
gatattgtgactcaagcaatggcacaagaagggttatcggagcctgtgagagaaagatta
gttcagacgcttcaaggtttacaggactttgatcagaaattatcaacatcacgcaactcg
gacgcacatacaagaacaggtacaagttatgaccatgcaactgactatgacgatgcaacc
aaaaatagtccggtaatgagtgggctaagctcaagcgaacggattcatctaatggatgga
ttccaccgcattggtgagggagaaggttcaactcaatctaggatggagaacacccgattt
aacggtcaaggtgcgaacatgcaacttgagtccattgccaataagatgtcgccagaagat
aaagcagcaattttaggttctcttccagattcggtaagggcgaatgtcgagcgaggtatg
gaattaaccgcaagcaattcatcgccatcaagtgaaaaattgcccataggtgagacacaa
ttcccattaagcccagtggcttcggctcagggtgatgcggtgagccagcaaggcgcagcc
ccagcggccacggctcaaggtgacacggtgagccaacaaggcgcagcgcctgcaactacg
gctcagggtgatgcggtgagccaacaaggcgcagccccagcggccacggctcaaggtgac
acggtgagccaacaaggcgcagcgcctgcaactacggctcagggtgatgcggtgagccag
caaggcgcagccccagcggccacggctcaaggtgacactgtgagccaacaaggcgcagcg
cctgcaactacggctcaaggtgacacggtgagccaacatagcgcagccccagcggccacg
gctcaaggtgacacggtgagccaacatggcgcagcgcctgcaactacggctcagggtgat
gcggtgagccaacaaggcgcagcgcctgcaactacggctcagggtgatgcggtgagccag
caaggcgcagccccagcggccacggctcaaggtgacacggtgagccaacaaggcgcagcg
ccagcggccacggctcaaggtgacacggtgagccaacaaggcgcagcgcctgcaactacg
gctcagggtgatgcggtgagccagcaaggcgcagccccagcggctacggctcaaggtgac
acggtgagccaacaaggcgcagcaccagcaagtacggctcagggtgatgcggtaagtaca
gcaagtcctgaaagaagtgaaccagaggttcgttatgtcgaaactcctgccgaaaattct
acgcaatcgggaagtacagttgttgagaacaatcctttcgccttcgatggtaatcaagct
ggattcaatttctctgtattgggcggatttgggaacaacgtccaaccctcaaacgtgagt
tataacagtgttgatttggtgggtggtgttgcggccagcggtcactctgtcgcaggttcc
agtagtagcggtggaccatctatggacacttccaatagcaacgtgccaacgatggagcgt
tga
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integrated database retrieval system
