KEGG   Sphingomonas degradans: ACG3SL_02480
Entry
ACG3SL_02480      CDS       T12016                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
sder  Sphingomonas degradans
Brite
KEGG Orthology (KO) [BR:sder00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sder03032]
    ACG3SL_02480 (parE)
   03036 Chromosome and associated proteins [BR:sder03036]
    ACG3SL_02480 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sder02048]
    ACG3SL_02480 (parE)
Enzymes [BR:sder01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     ACG3SL_02480 (parE)
DNA replication proteins [BR:sder03032]
 Prokaryotic type
  DNA Topoisomerases
   ACG3SL_02480 (parE)
Chromosome and associated proteins [BR:sder03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    ACG3SL_02480 (parE)
Prokaryotic defense system [BR:sder02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    ACG3SL_02480 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: YBV26560
LinkDB
Position
1:complement(527238..529214)
AA seq 658 aa
MPEDLFAATGAPTETYDASSIEVLEGLEPVRRRPGMYIGGTDERALHHLAAEVLDNAMDE
AVAGHANRIEVTLAAGNRITIVDNGRGMPVDPHPRFPDKSALEVILSMLHSGGKFSGKAY
ATSGGLHGVGVSVVNALSVDTVVEVARDKQLYRQRFSQGQTLGPLEHLGGTPNRRGTSVA
FTPDTEIFGEMLFRPSRLYKLARSKAYLFGGVEIRWKCDPSLITDDTPAEAVFQFPGGLA
DHLKEQLGARECATAEFFSGQQDFADGQGRVEWAVAWPLWSDGSYSWYCNTIPTPDGGSH
EQGLRQALVRSIRAFGELVGQKKAKDITADDIVVGAELMLSVFIREPQFQSQTKDRLTSP
EATALVEKAMRDHFDHFLSDRMDRGKALLAYVIDRMDDRLRRKQEREVKRKTATSARKLR
LPGKLTDCSADDPKGTELFIVEGDSAGGSAKQARDRKTQAILPIRGKILNVASATSAKIL
ANQEIADLILAMGCGTRKDCDVSQLRYERIIIMTDADVDGAHIATLLMTFFFQEMPDLVR
QGHLYLAQPPLYRLTVGSKSLYARDDAHRAEIEATAFKGKKVEVSRFKGLGEMNPNQLKE
TTMDPKTRGMLRVTLPHEYEERASVKDLVDRLMGNNPAHRFAFIQENAGRLDEDVIDA
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgccagaagacctgtttgccgccaccggcgcccccaccgaaacctatgacgcttcgtcg
atcgaggttctcgaagggctggagcctgtccggcgccggcccggcatgtatatcggcggc
accgacgagcgtgcgctgcaccacctcgccgccgaagtgctcgacaatgcgatggacgag
gcggtcgccggccatgccaaccgcatcgaagtgacgctggcggcggggaaccgcatcacg
atcgtggacaatggccgcggcatgccggtggacccgcacccgcgcttccccgacaagtcg
gcgctcgaagtcatcctgtcgatgctccattcgggcggcaaattctccggcaaggcctat
gccacgtcgggcggcctgcacggcgtcggcgtgtcggtggtcaacgcgctgtcggtcgac
accgtggtcgaggtcgcgcgcgacaagcagctgtaccgccagcggttcagccaggggcag
acgctgggcccgctcgaacatctgggcggcacccccaaccggcgcggcaccagcgtggcc
ttcacgcccgacaccgagattttcggcgagatgctgttccgcccctcacggctgtacaag
ctcgcccggtccaaggcgtatctgttcggcggcgtcgagatccgctggaaatgcgacccc
agcctcatcaccgacgacacgccggcagaggcggtgttccagttccccggcgggctcgcc
gatcacctgaaggaacagctcggcgcgcgcgaatgcgcgacggcggagttcttttcgggg
caacaggacttcgccgacggccagggccgcgtcgaatgggcggtcgcctggccgctgtgg
agcgacggcagctatagctggtattgcaacaccatccccacccccgatggcggcagccac
gaacaggggctgcgccaggcgctggtccgcagcatccgcgcgttcggcgagctggtgggg
cagaaaaaggccaaggacatcaccgccgacgacatcgtggtcggcgccgagctgatgttg
tcggtcttcatccgcgagccgcaattccagtcgcagaccaaggaccggctcaccagcccc
gaggcgaccgcgctggtcgaaaaggcgatgcgcgaccatttcgaccatttcctgtcggac
cggatggatcgcggcaaggcgctgctcgcctatgtgatcgatcgcatggacgaccgcctg
cgccgcaagcaggagcgtgaagtcaagcgcaagaccgcgaccagcgcccggaaactgcgc
ctgcccggcaagctgaccgactgttccgccgacgatcccaagggcaccgaactgttcatc
gtcgaaggcgattcggccggcggcagcgccaagcaggcgcgcgaccgcaagacgcaggcg
atcctgccgattcgcggcaagatcctgaacgtcgcgtccgccacctcggccaagatcctg
gcgaaccaggaaatcgccgacctgatcctcgccatgggatgcggcacgcgcaaggactgc
gacgtcagccagctgcgctacgaacgcatcatcatcatgaccgacgcagacgttgacggc
gcgcatatcgccacgctgctgatgacgttcttcttccaggaaatgcccgatctggtgcgc
caggggcatctgtatctggcgcagccgccgctgtaccggctgaccgtggggtccaagagc
ctctacgcccgcgacgacgcgcaccgcgcggagatcgaggcgaccgcgttcaaggggaag
aaggtcgaagtcagccgcttcaagggcctgggggagatgaaccccaaccagctcaaggaa
acgacgatggaccccaaaacgcgcgggatgctgcgcgtcacgctcccgcacgaatatgag
gagcgcgcgagcgtgaaggacctggtcgaccggctgatgggcaacaacccggcacaccgc
tttgccttcatccaggaaaatgccgggcggctcgacgaggatgtgatcgacgcctga

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