Sphingomonas degradans: ACG3SL_06940
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Entry
ACG3SL_06940 CDS
T12016
Symbol
trmFO
Name
(GenBank) methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
KO
K04094
methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:
2.1.1.74
]
Organism
sder Sphingomonas degradans
Brite
KEGG Orthology (KO) [BR:
sder00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sder03016
]
ACG3SL_06940 (trmFO)
03036 Chromosome and associated proteins [BR:
sder03036
]
ACG3SL_06940 (trmFO)
Enzymes [BR:
sder01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.74 methylenetetrahydrofolate---tRNA-(uracil54-C5)-methyltransferase [NAD(P)H-oxidizing]
ACG3SL_06940 (trmFO)
Transfer RNA biogenesis [BR:
sder03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
ACG3SL_06940 (trmFO)
Chromosome and associated proteins [BR:
sder03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
ACG3SL_06940 (trmFO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIDA
DAO
NAD_binding_8
FAD_oxidored
Pyr_redox_2
FAD_binding_2
HI0933_like
Pyr_redox
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
YBV27401
LinkDB
All DBs
Position
1:complement(1549374..1550708)
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AA seq
444 aa
AA seq
DB search
MPTHDIHIIGGGLAGSEAAWQLAQAGRKVRLSEMRGSGDMTPAHQSDRLAELVCSNSFRS
DDAERNAVGLLHAEMRALGSLIFGTADKHQVPAGSALAVDRDGFADSVTAALAAHPNIEI
VRERVDTLPAEGLAIVATGPLTAPSLAESIGAATGKDSLAFFDAIAPIVHRDSIDMDVAW
MQSRWDKVGPGGTGKDYINCPMTKDQYLAFHAALLAGEKTEFREWENVPYFEGCMPIEVM
AERGVDTLRYGPMKGVGLDQPSTGRWPYACVQLRQDNASGTLWNMVGFQTKLRYAEQVSL
FRTIPGLENAEFARLGGLHRNTFIKSPELLDATLRLKSRPNIRFAGQITGCEGYVESSAI
GMLAARFAIAELAGTTLPPPPRETALGALLAHITGEAEVETYQPMNVNFGLFPPIEGRTK
KADRKLMYTARARTAFAEWVPALG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccacgacatccacatcattggcggcggccttgccgggtccgaggctgcctgg
cagctggcgcaggcgggacgcaaagtgcggctgtcggaaatgcgcggatcgggggacatg
accccggcgcaccagagcgaccggctggcagagctggtctgttccaacagcttccgttcc
gatgatgccgagcgcaatgcggtggggctgctccatgccgagatgcgcgcgctgggatcg
ctgatctttggcacggcggacaagcatcaggtgcccgccggctccgcgctggcggtggac
cgcgatggtttcgccgacagcgtcactgccgcgctcgccgcgcatcccaatatcgaaatc
gtccgcgagcgcgtcgacacgctccccgccgagggccttgccatcgtcgccaccgggccg
ctgactgcgccttcgctggccgaaagcatcggcgcggccacgggcaaggacagcctcgcc
tttttcgacgcgatcgccccgatcgtccaccgcgacagcatcgacatggacgtggcctgg
atgcagtcgcgctgggacaaggtcggccccggcggaacgggcaaggattatatcaactgc
ccgatgaccaaggaccagtatctcgccttccacgcggcgctgctcgccggcgagaagacc
gagttccgagaatgggagaacgtcccctatttcgaaggctgcatgccgatcgaagtcatg
gcggagcgcggcgtcgatacactgcgttatggcccgatgaagggcgtggggctcgaccag
ccgagcaccgggcgctggccctatgcctgtgtacagctgcgccaggataacgccagcggc
acgctgtggaacatggtggggttccagacgaagctgagatatgccgagcaagtctctctg
ttccggacgattccggggctggagaatgccgagttcgcgcggcttggcgggctgcaccgc
aacaccttcatcaagtcgcccgagctgctggacgccacgctccggctgaaatcgcgcccc
aatatccgcttcgcgggccagatcaccggctgcgaaggctatgtcgagagttcggcgatc
gggatgctcgcggcgcgcttcgccatcgccgaactggccggcaccaccctgcccccgccc
ccgcgcgaaacggcgctgggcgcgctgctggcgcacatcaccggcgaggcggaggtcgag
acctatcagccgatgaacgtcaatttcgggctgttccccccgatcgagggtcgcacgaag
aaagccgatcgcaagctgatgtacaccgcgcgggcgcgcactgcatttgcggaatgggtg
ccggcgctcggttga
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