Sphingomonas degradans: ACG3SL_08710
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Entry
ACG3SL_08710 CDS
T12016
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
sder Sphingomonas degradans
Brite
KEGG Orthology (KO) [BR:
sder00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sder03009
]
ACG3SL_08710
Enzymes [BR:
sder01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
ACG3SL_08710
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
ACG3SL_08710
Ribosome biogenesis [BR:
sder03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
ACG3SL_08710
23S rRNA modification factors
ACG3SL_08710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
YBV27729
LinkDB
All DBs
Position
1:complement(1965965..1966711)
Genome browser
AA seq
248 aa
AA seq
DB search
MAKLRADQMLVDRGLVESRTRAQALIMAGLVFAGDRKVEKAGQMLPDDTLLDVRGRDHPW
VSRGGIKLAHALDHFALDVAGAVAIDVGSSTGGFTDVLLSRGAARVYAVDSGTNQLAWKL
RQDPRVIVHEQTSARILTEAHIPEPVGVIVCDASFIGLAKVLDVPLGFASPDAWLVALIK
PQFEAGREEVGKGGVVRDPAVHARVCAEVAEWVASRGWRVAGIAESPITGPEGNIEFLIA
AQRDDTAA
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcttcgcgccgatcagatgctcgtcgaccgcggtctcgtcgagagccgcacc
cgggcgcaggcgctcatcatggcggggctcgtcttcgcgggcgatcgcaaggtggaaaag
gcggggcagatgctccccgacgacacgctgctggacgtgcgcggtcgcgaccatccctgg
gtgtcgcgcggcgggatcaagctggcgcacgcgctcgatcatttcgcgctggatgtggcg
ggcgcggtcgcgatcgacgtcgggtcttccaccggcgggttcaccgacgtgctgctcagt
cgcggggcggcgcgcgtctatgcagtggacagcggcaccaaccagctggcgtggaagctg
cgccaggacccccgcgtcatcgtccacgaacagaccagcgcgcgcatcctcactgaagcc
catatccccgagccggtcggcgtgatcgtgtgcgacgccagcttcattgggctggccaag
gtgctcgacgtcccgctggggttcgcgagccccgatgcgtggctggtcgcgctcatcaag
ccgcagttcgaggcggggcgcgaggaagtggggaagggcggggtggtgcgcgatcccgcc
gtgcatgcgcgcgtctgcgccgaagtggccgaatgggtcgcgtcgcgcggctggcgcgtc
gccggcatcgccgaaagcccgatcacggggccggaaggcaatatcgagttcctgattgcc
gcgcagcgggacgacactgccgcgtga
DBGET
integrated database retrieval system
