Sphingomonas degradans: ACG3SL_15550
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Entry
ACG3SL_15550 CDS
T12016
Name
(GenBank) efflux RND transporter permease subunit
Organism
sder Sphingomonas degradans
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Paralog
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
YBV25071
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Position
1:3414922..3418113
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AA seq
1063 aa
AA seq
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MSRIFIDRPIFAWVLAIIVMLMGLGAIYSLPIAQYPDVAPPQVNVRASYPGASAETVQNS
VTQVIEQQLTGIDGLLYFSSSSSSRGSVTISATFEKGTDPDIAQVQVQNQVQQALSRLPQ
QVQQQGLRVTKSNPDFLLLVGVYDETDRSTNQDVSDWLASNLQDQLARVEGVGDTNVFGS
AYAMRIWLNPDRLASYALMPSDVITAIQNQNTEVAAGEIGGQPQPNTQMLNATVTAQSRL
QTPEQFRKIILKTQTSGAAVRLSDVARIELGAESYNAVSRVNGHPGAGIAISLAPGADAL
KTAELVKAQVEKISRTFPAGFKYAYANDTTAFIKLSIDEVVKTLIEAIILVVIVMFVFLQ
SWRATLIPTIAVPVVLLGTFGVFYALGFSINTLTLFGLVLAIGLLVDDAIVVVENVERLL
EENPDMTPREATIKSMDEIQVALVAIALVLSAVFLPMAFFGGSTGVIYRQFSVTIVSAMV
LSVLVALILSPALTATLLKQKHAQEPGWVERRFPRVGHFFTRAKDGFNNGFNKGVERYTA
SVLTVVNRKWLFLLLYAGVVALLVVMFTRLPTGFLPTEDQGAAQLQFRLPAGATQGRTME
VQQALERYFRENEAKNVGTMFTVTGGGGGGGASGQNTGQGFLNFTDWSQRKGKENSADAI
VARASAAFRNFRDAQVFALVPGAIRGLGQSNGFTMELQNAGGMSREQFTAARDKLLAAAN
QDPLLASVRLSDLPDVATLKVDVDNEKLAALGLSQTDVNNTLATAWGGRYVNDFIDRGRV
KRVYVQGDAQYRAAPSNIDEWFVRSNTGEMAPFSSFAQTSWATAPTTLSRFQGIPAFEFQ
GQPAPGTSSGEAMNRMEQLAAQIPGTSVAWAGLSYQERLSSGQAPLLYGISLIVVFLCLA
ALYESWSIPVAVLLVIPLGLVGAIFAVTLRGLQNDVYLQIGLLTTMGLAAKNAILMIEFA
ERAEKEGKRVIDAALEAARLRLRPILMTSLAFIFGVLPLAISTGAGANSRIAIGTAVIGG
MLTATILAIFYIPLFFVLVRRGVRDGLKAIRGRLHPQNPERAA
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggattttcatcgatcggccgatcttcgcatgggtgctcgcgatcatcgtgatg
ctgatgggattgggggcgatctattcgctgccgatcgcgcagtatcccgacgtcgccccg
ccccaggtcaacgtccgcgccagctatcccggcgcgtcggcggagaccgtgcagaacagc
gtcacccaggtgatcgagcaacagctgaccgggatcgacgggctgctgtatttcagctcc
tcgtccagctcgcgcgggtcggtgacgatctccgccacgttcgaaaagggcaccgatccc
gacatcgcccaggtccaggtgcagaaccaggtccagcaggcgctgtcgcggctgccgcaa
caggtgcagcaacaaggcctgcgcgtcaccaagtcgaaccccgacttcctgctgctcgtc
ggcgtctatgacgagaccgaccgcagcaccaaccaggacgtgtcggactggctggcgtcc
aaccttcaggaccagctggcgcgagtcgagggcgtgggcgacaccaatgtgttcggatcg
gcctatgcgatgcggatctggctgaacccggatcggctggcgagctatgcgctgatgccg
agcgacgtcatcaccgcgatccagaaccagaacaccgaagttgccgccggcgaaatcggc
ggacagccgcagcccaatacccagatgctcaacgcgaccgtgaccgcacagtcgcggctc
cagacccccgaacagttccgcaagatcatcctcaagacgcagaccagcggcgccgccgtg
cgcctgtccgacgtcgcgcggatcgagctgggggccgagagctacaacgcagtcagccgc
gtcaacggccatccgggcgcgggcatcgcgatttcgctggcgccgggcgccgacgcgctc
aagaccgccgagctcgtcaaggcgcaggtcgagaagatctcgcgcaccttccccgccggc
ttcaaatacgcctatgccaacgacacgacggcgttcatcaagctgtcgatcgacgaagtc
gtcaagacgctgatcgaagcgatcatcctggtggtgatcgtgatgttcgtgttcctgcaa
agctggcgcgcgacgctgatccccacgatcgcggtgccggtggtgctgctgggtacgttc
ggcgtgttctatgcgctggggttcagcatcaacacgctgacgctgttcgggctggtgctg
gcgatcggcctgctggtcgacgacgcgatcgtcgtggtcgagaatgtcgagcgcctgctc
gaagagaaccccgacatgaccccgcgcgaggcgaccatcaaatcgatggacgaaatccag
gtcgcgctggtcgcgatcgcgctggtcctgtcggcggtgttcctgccgatggcgttcttc
ggcggatcgacgggggtgatctatcgccagttctcggtgacgatcgtgtcggcgatggtg
ctgtcggtgctggtcgcgctgatcctgagcccggcgctgactgcgacgctgctcaagcag
aagcatgcgcaggaacccggctgggtcgagcgccgcttcccccgcgtcggccatttcttc
acccgcgccaaggacgggttcaacaacggcttcaacaaaggcgtcgagcgctataccgcg
tcggtgctgacggtggtgaaccgcaaatggctgttcctgctgttgtacgcgggcgtcgtc
gcgttgctggtggtgatgttcacgcgcctgcccaccggcttcctgccgaccgaggaccag
ggagcggcgcagctccagttccgcctgcccgccggcgcgacgcaaggccgcacgatggaa
gtgcagcaggcgctggaacgctatttccgcgagaacgaggccaagaatgtcggcacgatg
ttcaccgtcaccggcggcggcggcggtggcggggcgagcgggcagaacacgggccaggga
ttcctgaacttcaccgactggagccagcgcaagggcaaggaaaacagcgccgacgcgatc
gtcgcgcgtgcctccgccgcgttccgcaatttccgcgacgcacaggtcttcgcgctggtc
cccggcgcgatccgggggctgggccagtccaacggcttcacgatggaactccagaacgcc
ggcggcatgtcgcgcgagcaattcaccgccgcgcgcgacaagctgctcgccgccgcgaac
caggacccgctgctcgcatcggtccgcctgtcggacctgcccgatgtcgcgacgctcaag
gtcgatgtcgataacgaaaagctcgccgcgcttgggctgagccagaccgacgtgaacaac
acgctcgccaccgcatggggtgggcgttacgtcaacgacttcatcgatcgcggccgcgtg
aagcgtgtctatgtccagggcgatgcgcagtaccgggccgcgccgagcaatatcgacgag
tggttcgtgcgatcgaacaccggcgagatggcccccttctcgtccttcgcccagaccagc
tgggcgaccgcgccgactacgctgtcgcggttccagggcattcccgccttcgagttccag
ggccagccggcgccgggcaccagctcgggcgaggcgatgaaccggatggaacagctggcg
gcgcagattccgggcaccagcgtcgcctgggccgggctgtcctatcaggagcgattgtcc
tctgggcaggcgccgttgctgtacggcatctcgctgatcgtcgtgttcctgtgtctggcc
gcgctgtacgaaagctggtcgatcccggtcgcggtgctgctggtcattccgctggggctt
gtcggcgcgatctttgccgtcacgctgcgcggactgcagaacgacgtgtacctccagatc
gggctgctgacgaccatggggctggccgcgaagaacgcgatcctgatgatcgagttcgcc
gagcgcgccgaaaaggaaggcaagcgcgtcatcgacgccgcgctggaagccgcccgtctg
cgcctgcgcccgatcctgatgaccagcctggcgttcatcttcggcgtgctgccgctggcg
atttcgaccggcgcgggcgcgaacagccgcatcgcaatcggcaccgccgtgatcggcggc
atgctgaccgcgacgatcctggcgatcttctacatcccgctgttcttcgtgctggtgcgg
cgcggcgtgcgtgacgggttgaaggcgatccgcgggcgcctccacccccagaacccggag
cgcgcggcatga
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