Staphylococcus devriesei: Q2T90_02600
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Entry
Q2T90_02600 CDS
T09366
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sdev
Staphylococcus devriesei
Brite
KEGG Orthology (KO) [BR:
sdev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdev03009
]
Q2T90_02600 (rlmD)
Enzymes [BR:
sdev01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Q2T90_02600 (rlmD)
Ribosome biogenesis [BR:
sdev03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Q2T90_02600 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_25
MTS
PrmA
TRAM
Methyltransf_11
N6_N4_Mtase
RE_EcoO109I
Methyltransf_12
RVT_1
DUF7089
TPMT
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
WKU13841
LinkDB
All DBs
Position
complement(508652..510028)
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AA seq
458 aa
AA seq
DB search
MEVINKNDIKQGTVIDLTHEGHGVVKFDRYPIFVPNALIDEDIEFKIIKVKKNFAIGKLM
NVIKESENRVEPPCKYYWKCGGCQLQHMTYEAQLAMKKEQVVNLFHRKAQFNNTVINDTV
GMNNPWRYRNKSQLPIGKDKDNFAIMGYYRQRSHDIIDMDSCLIQDEQHQEIMNQVKQWL
NELKVSIYNEKTKKGLLRHLVIRTGHYTDEIMVIFVTNGSKFKQANILVEKLNKAFPNIT
SIKQNINNSHSNVIMGQQSVTLYGKDKIVDQLSDTTFKISDQSFYQINSSQTEKLYQKAI
DYAQLDGEETVLDTYCGIGTIGLYMAPVAKHVYGVEVVPSAIKDAQQNATLNQLENTTFV
CGKAEDVIIEWKQQGIKPDVVMVDPPRKGCDETFLDTLLTLNPKRIVYISCNPSTQQRDA
QILATKYHLKEITPVDMFPQTTHIETVALFERLDNPFN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaataaataaaaatgatattaaacagggaacggtgattgacctaacgcatgaa
ggtcatggagtagttaaatttgatcgctatcccatatttgtgcccaatgcattaatagat
gaagatatcgaatttaagattattaaagttaaaaagaattttgcaattgggaaattaatg
aacgttatcaaagaaagtgaaaaccgtgttgagccaccatgtaaatattattggaaatgc
ggtggttgccagttacaacatatgacctacgaagcgcaattagcaatgaagaaagagcag
gttgtgaaccttttccatagaaaggctcaattcaacaatacagttattaatgatacggta
ggtatgaataatccttggcgctataggaataagtctcagcttccaattggtaaagataaa
gacaactttgcaatcatggggtattaccgtcaaagaagccatgatattatcgatatggac
agctgtttaattcaagatgaacaacatcaagaaattatgaatcaagttaaacaatggctt
aatgaattaaaagtaagtatttataatgaaaaaacgaaaaaaggcttgctaagacattta
gttatacgtaccggtcattacacagatgaaattatggttatctttgtgacaaatggttcg
aaatttaaacaagctaatattttggttgaaaagttaaataaagcttttccaaatattaca
agtattaaacagaacattaataatagccattcgaatgtcattatggggcaacaatcggta
acgttatatggtaaagataaaattgttgatcaattaagcgatactacatttaaaatcagc
gaccaatctttttatcaaattaattctagtcaaactgaaaaactttatcaaaaagcaatc
gattatgctcaattagatggtgaagaaacagtgcttgatacttattgcggaattggtacg
attggtctttatatggcgccggtagctaagcacgtttatggagtagaagtcgtgccctct
gcgattaaagacgcacaacaaaatgcgactttaaaccaattagaaaatacgacttttgtc
tgtggtaaggcagaagatgtcattatagaatggaaacaacaaggaattaaacccgatgtg
gtaatggtcgatccaccacgtaagggatgcgatgaaacctttttagatacattattaacg
cttaatcctaaacgtattgtttatatatcctgtaatccatcaacacaacaaagagatgct
caaatactggctacaaagtatcatttgaaagaaattacgccagtcgatatgttccctcaa
acgacacacatcgaaacagttgcgctatttgagagattagataatccatttaattaa
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