Staphylococcus devriesei: Q2T90_03135
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Entry
Q2T90_03135 CDS
T09366
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sdev
Staphylococcus devriesei
Pathway
sdev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q2T90_03135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdev03019
]
Q2T90_03135
03009 Ribosome biogenesis [BR:
sdev03009
]
Q2T90_03135
Enzymes [BR:
sdev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Q2T90_03135
Messenger RNA biogenesis [BR:
sdev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q2T90_03135
Ribosome biogenesis [BR:
sdev03009
]
Prokaryotic type
rRNA helicases
Q2T90_03135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Flavi_DEAD
DOPA_dioxygen
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WKU13937
LinkDB
All DBs
Position
complement(611568..613082)
Genome browser
AA seq
504 aa
AA seq
DB search
MQNFKELGISDKTVETLEAMGFKEPTPIQTESIPYTLEGKDVLGQAQTGTGKTGAFGIPL
IEKVVGQSGVQALILAPTRELAMQVAEQIREFSHGQNVQVVTVFGGMPIDRQIKALKRGP
QIVVGTPGRVIDHLNRRTLKTQDIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTML
FSATMPKAIQSLVQQFMKSPQIVKTMNNEMSDPHIDEYYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQLDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEEANN
RRMSALRPPHRKEVLKAREEDIKDKVKNWMSRESEDRLKRISSELLEEYDSTELVASLLQ
ELVEANDEVEVQLTFEKPLARKNRQQGKGNNSRRSGKRNNKFDNKNKRSKGNFNKKKGKK
PERRDNQNKGRSSMKGRTFADLQK
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttaaagaactagggatttcggataaaacagttgagacccttgaagcaatg
ggttttaaggaaccaacacctatccaaacagaaagtatcccttacacattagagggaaaa
gacgtcctagggcaagctcaaactggtacaggtaaaacaggagctttcgggattccttta
attgaaaaagttgtcggacaatcaggcgttcaagccttaatcttagcaccgactagagaa
ttagctatgcaagtagcggaacagatacgtgaattcagtcacggacaaaatgttcaagta
gttactgtattcggtggtatgccaatcgatcgacaaattaaagcattgaaacgtggaccg
caaattgtagtaggtacgccaggacgagttatcgaccatttaaatcgtcgtacattaaaa
actcaagacatccatacattaatcttggatgaagcggatgaaatgatgaacatgggattc
atcgatgatatgagattcattatggataaaattccagctgaacaacgacaaactatgtta
ttctcagcgacaatgcctaaagcaattcaaagtttagtacaacaatttatgaaatcacca
caaattgttaaaacaatgaataatgaaatgtcagatcctcatattgatgagtactataca
attgtgaaagaacttgaaaaattcgatacattcacaaacttcttagacgttcatcaacct
gaattagcaatcgtatttggtagaacaaaacgtcgtgtcgatgaactaacaagtgcatta
ttatctaaaggctataaagcagaaggtttacatggtgatattactcaagctaagcgttta
gaagtcttaaagaaatttaaaaacgaccaattagatattttagtagctacagacgtagca
gcccgtggtttagatatctcaggcgttagtcatgtatataactttgatattcctcaagat
actgaaagctacactcatagaattggacgtacaggccgtgccggtaaagaaggtatcgct
gtaacgtttgttaatccaattgaaatggattatattcgtcaaattgaagaagcaaataac
agaagaatgagcgctttaagacctcctcacagaaaagaagtactaaaagcacgtgaagaa
gatattaaagataaagttaaaaactggatgtcacgtgaaagtgaagaccgtttaaaacgt
atttcaagtgaattattagaagaatatgatagcacagaactcgttgcatcattattacaa
gaacttgtagaagctaatgatgaagttgaagttcaattaacttttgaaaaacctttagca
cgtaaaaaccgtcaacaaggtaaaggtaataactcacgtcgtagcggtaaacgcaacaat
aaatttgataataaaaataaacgttcaaaaggtaactttaacaagaaaaaaggaaaaaaa
cctgaacgtcgcgacaatcaaaacaaaggtagatcatctatgaaaggtcgcacatttgcc
gatttacaaaaataa
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