Staphylococcus devriesei: Q2T90_10630
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Entry
Q2T90_10630 CDS
T09366
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sdev
Staphylococcus devriesei
Pathway
sdev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q2T90_10630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdev03019
]
Q2T90_10630
Messenger RNA biogenesis [BR:
sdev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Q2T90_10630
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WKU13188
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All DBs
Position
complement(2155391..2157073)
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AA seq
560 aa
AA seq
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MKQLHSNEVGVYALGGLGEVGKNTYAIEYKNEIVIIDAGIKFPDDNLLGIDYVIPDYTYL
EQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLDEHNLLRNATLN
EITEDSVIKSKHFEISFYLTTHSIPEAYGVVVDTPEGKIVHTGDFKFDFTPVGEPANIAK
MAELGKEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNIYRVQQ
AVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKINNIPKHELLILCTGS
QGEPMAALSRIANGTHKQIKIIPDDTVVFSSSPIPGNTKSINRTINALYKAGADVIHSKI
SNIHTSGHGSQGDQQLMLRLIQPKYFLPIHGEYRMLKAHGQTGVDCGVDEDNVFIFDIGD
VLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFSTNKL
LSGPDIISRGFVYMRESGQLIYDAQRRIKTDVISKLNSNKDIQWHQIKSSIIETLQPYLF
DKTARRPMILPVIMKVNEDN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaactacattcaaacgaagtaggtgtatatgctctaggcggtttaggcgaagta
ggtaaaaacacatacgctatagagtataaaaatgaaatagtaattattgatgcaggtatt
aaattccctgatgataatttacttggaattgactatgtcattcctgattacacttatctc
gaacagaatcaagataaaattgtcggtctgtttataactcatggacacgaagaccatata
ggtggtgtgccctacctattaaagcaaattaatgtacctatttatggtggtccattagct
ttaggtttaattcgtaacaaactagatgaacataatttactacgtaatgcaactttaaat
gaaataacagaagatagtgttattaaatctaaacactttgaaatttcgttctatttaaca
actcacagtattccagaagcatatggtgtagtagttgatacgcctgaaggtaaaatagtc
catacaggcgattttaaattcgacttcacgcctgtcggtgagcctgcgaacatcgctaaa
atggctgaactaggaaaagaaggcgtattatgtttactttctgactctacaaatgcatta
gtacctgattttacgttaagtgaacgtgaagtaggccagaatgttgataaaattttccga
aactgtaaaggccgtattatattcgcaacatttgcgtcaaatatttatcgtgtacaacaa
gcagttgaagcggctatcaaatataaccgtaaaattgtaacattcggtcgctcaatggaa
aataatattaaaatcggaatggagttaggctatattaaagcaccacctgaaacatttgta
gaacctaacaaaattaataatatccctaaacatgaattattaattttatgtaccggctct
caaggtgaaccaatggcagctctatcacgtatcgccaatggtactcataaacaaatcaaa
atcattccagatgacactgtagtcttcagttcatcccctattccaggtaatactaagagt
attaaccgcactattaatgctttatataaagctggtgcagacgttattcatagtaagatt
tcaaatattcatacatctggtcacgggtcacaaggtgatcaacaattaatgttacgttta
attcaaccgaaatacttcttaccaatccatggtgaatatcgcatgttaaaagcacatgga
caaactggtgttgattgcggtgttgatgaagataacgtctttatctttgatatcggagat
gtattggctttaactcatgattccgctcgaaaagctggacgtataccatcaggtaatgtt
ctagttgatggtagtggtattggtgatataggtaatgtagttatccgtgaccgtaagcta
ttatctgaagaaggtttagttatagtcgttgttagtatcgactttagtacaaataaacta
ctttctggtccagatattatctcacgtggtttcgtctatatgcgtgaatcaggtcaactt
atctatgatgcccaacgaagaattaaaacggatgttatttcaaaattgaattccaataaa
gatattcaatggcatcaaattaaatcttcaattattgagacattacagccttatcttttc
gataaaactgcccgtcgtccaatgattttaccagtgattatgaaggttaatgaagataat
taa
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