Steroidobacter denitrificans: ACG33_03035
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Entry
ACG33_03035 CDS
T04296
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sdf
Steroidobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
sdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdf03016
]
ACG33_03035
Enzymes [BR:
sdf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ACG33_03035
Transfer RNA biogenesis [BR:
sdf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ACG33_03035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AMN46099
UniProt:
A0A127F960
LinkDB
All DBs
Position
complement(709160..710263)
Genome browser
AA seq
367 aa
AA seq
DB search
MQATLPIATSADLLLALERLSAARFLALDTEFMRESTYFPQLCLIQAATPDFCTLIDPLA
IPDLQPLWQLLANRECTKVLHAARQDYEVISLTSPSGPPGPVFDTQIAAALLGYPAQIGY
GPLVAERLSVTLAKAHTRADWSRRPLSEEQLRYAADDVRYLVPLYLDLRNALEAAGRLEW
LLEETCELERLELHRTDPRTAWQRLKGLDRLQPEQRATAKLLAQWRENTAMRHDKPRGWI
LTDDALREIAERLPASIQDLGRIRTLPAGVIRRRGAELLSLVEQGCGMADAEAPATLPQR
PEPQQLSQVTRLMNFVRTQAQELRISPELLATRRDVERLVFSGHAERLTKGWRREVIGEH
LAALAGA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccacgcttcccatagctacgtccgccgatctcctgttggccctggagcggctg
tcggccgctcgtttccttgctctcgacaccgaattcatgcgcgagagcacctatttccct
cagctctgcctcattcaagccgccacgccggatttctgtacgctcatcgatccgctggcg
atacccgatctgcagccgctatggcaactgcttgcaaaccgcgaatgcaccaaggtgctg
catgcggcgcgccaggactacgaagtgatctccttgaccagcccatcgggcccgccaggt
ccggtgttcgacacccagatcgcagcagccctgctcggctaccccgcgcagatcggctac
gggccgctcgttgccgaacgcctgagcgttaccctggcaaaggctcatacacgtgcggac
tggtcgcgacggccgctcagcgaggagcaactgcgctatgccgccgacgacgtacgttat
cttgtgcccttgtatctggatctgcgtaacgccctggaggcggccggccggctggaatgg
ctgcttgaggagacatgcgaactcgaacgtctggagttgcaccgaaccgatccgcggact
gcatggcaacggctcaagggattggaccggctgcaacccgagcagcgcgccactgcgaag
ctgctggcgcaatggcgtgaaaacaccgcaatgaggcacgacaagcctcgaggctggatt
cttaccgatgacgccctgcgcgagatcgccgagcgtctgcccgcgagcatccaggatctc
gggcggatccgcaccctgcctgccggtgtcattcgccgtcgaggcgcggaactattgtcg
ctggtggagcaagggtgcggcatggcggacgccgaagcgcccgcaacactgccgcagcgg
cccgaaccacaacagctctcacaagtgacgcggctcatgaacttcgtacgcacccaagcc
caggagttgcgcatcagtcccgaactgctcgcgacacgtcgcgatgtcgagcgcctggtg
ttctcgggtcatgccgagcgcctgacgaagggatggcgccgcgaagtgatcggcgagcac
ctggccgcactcgccggagcctga
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