Steroidobacter denitrificans: ACG33_05225
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Entry
ACG33_05225 CDS
T04296
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sdf
Steroidobacter denitrificans
Pathway
sdf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACG33_05225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdf03021
]
ACG33_05225
03400 DNA repair and recombination proteins [BR:
sdf03400
]
ACG33_05225
Enzymes [BR:
sdf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACG33_05225
Transcription machinery [BR:
sdf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACG33_05225
DNA repair and recombination proteins [BR:
sdf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACG33_05225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AMN46506
UniProt:
A0A127F7T2
LinkDB
All DBs
Position
1188582..1192790
Genome browser
AA seq
1402 aa
AA seq
DB search
MKDLLKLFKQHTPVENFDSIRIGLASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVVCEKCGVEVTQSKVRRERMGHIELASPTAHIWFLKSL
PSRIGLMLDMTLREIERVLYFEAFVVIEPGMTQLQRGQLLTDEMYLEAIEEHGDEFDARM
GAEAVFELLKSLDLPAEVLKVREEILGTNSETKIKRLTKRLKLLESFIHSGNKPEWMVLT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHQCGLPKKMALELFKPFIFSKLQLRGEASTIKAAKRMVEREGPEVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEA
RALMMSSNNILSPANGDPIIVPSQDVVLGLYYMTRERVNARGEGMLFADVQEVHRAYETR
TAELQAKVKVRVQEYVLQADGSHEQRCRVVDTTVGRALLSEILPKGLSFDAVNRDMTKKA
ISAAINLCYRSVGLKETVVFADQLMYTGFAYATRAGVSIGVDDMVVPQQKGKILSGAERE
VKEIQEQYASGLVTNGERYNKVVDIWSRTNDQVAKAMMDKLGVEESLDAKGQTVVQKSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNAMQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVATELDCGTTNGLMMTPIVEGGDVVEGLGERVL
GRVAAEDVYRPSGDAVVIEAGTLIDEKLVKVLEHEGVDQVKVRSPISCETRYGVCAQCYG
RDLARGHRINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAANSVEAKGKGAARL
HNIKTVHHEKGHWVAISRSGELGIIDEFGRERERYKIPYGATIMVADGDPIESGQILATW
DPHTHPVVTEVAGFIKFQDFVDGVTAQSQVDEVTGLSSTVVTDPKQRSSSGKDLRPVVKL
VNAKGKEVTFANTDIPAVYALPSGAIVNLEDGAKVSVGDVIARIPQESSKTRDITGGLPR
VADLFEARKPKDSAILAEYTGTVSFGKETKGKRRLIITDEQGEKHEELIPKWRRLNVFEG
EMIERGEVIADGEPNPHDILRLQGVSSLANYLVREIQDVYRLQGVKINDKHIEVIIRQML
RKVEIAHAGDTNLLRGEQLDRARVTDINERALEEGKIEARIEPVLLGITKASLATESFIS
AASFQETTRVLTEAAVRGLKDDLRGLKENVIVGRLIPAGTGSFYHQRRRREAAGSAAGFM
DVGATATDTEEPVADEAGATAE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacttactgaagttgttcaagcagcatacgccggtcgagaatttcgactcgatc
cgaatcgggctggcatcgccggaaatgatccgttcctggtcgttcggcgaagtcaagaaa
cccgagacgatcaattaccgcacgttcaagccggaacgcgatggcctgttctgcgcgaag
atcttcggaccggtgaaggactacgagtgcctttgcggcaagtacaagcgcttgaagcat
cgcggcgtggtctgcgagaagtgcggcgtcgaagtgacgcaatccaaggtccgccgcgag
cgcatggggcatatcgagcttgccagccccaccgcgcacatctggttcctcaaatccctg
ccctcgcgcatcggtctgatgttggacatgaccctgcgcgagatcgaacgcgttctgtat
ttcgaagcattcgtggtcatcgaacccggcatgacccagctgcagcgtggtcagctgctg
accgatgagatgtatctcgaggcgatcgaggagcacggcgacgagtttgacgcgcgcatg
ggcgcggaggccgtgttcgagctgctgaagtcgctggatctgccggcggaggtgctcaag
gttcgcgaggagatcctgggaacgaattcggagaccaagatcaagcgcttgaccaagcgg
ctgaagttgctggagtcgttcatccattccggcaacaagcctgagtggatggtgctgacg
gtgctgccggtgctgccgcccgatctgcgtccgctggtgcccctggacggcggccgcttc
gcaacctccgatctgaacgacctgtatcgccgcgtcatcaaccgcaacaatcgcctgcgg
cgcctgctggagctcaacgcgcccgacatcatcgtgcgcaacgaaaagcgcatgctgcag
gaagcggtggatgcgctgctcgacaacggccgccgcggccgggcgatcaccggcacgaac
aagcgtccgctgaagtcgctggccgacatgatcaagggcaagcaggggcggtttcgccag
aacctgctgggcaagcgcgtggactattccggccgctcggtcatcgtggtcggtccgacc
ctgcgcctgcatcaatgcggcctgcccaagaagatggcgctggagctgttcaagccgttc
attttctccaagctgcagctgcgcggcgaagcctccaccatcaaggcggccaagcgcatg
gtggaacgcgagggcccggaggtctgggacatcctggaagaagtcattcgcgaacatccg
gtcatgctcaatcgagcgccgacgctgcaccgcctcggcatccaggcgttcgagcccgtg
ctgatcgaaggcaaggccatccaactgcatccgctggtgtgcacggcgttcaacgccgac
ttcgacggtgaccagatggcggtccatgtgccgctgtcgctggaggcgcagttggaggcc
cgtgcgctgatgatgtcgtccaacaacatcctctcacccgccaacggcgatccgatcatc
gtgccctcccaggacgtcgtgctgggcttgtactacatgacccgcgagcgcgtgaatgcc
cgtggcgaggggatgttgttcgctgatgtgcaggaggtccaccgggcctacgagacccgc
acggccgaactgcaggcgaaggtgaaggtgcgcgtgcaggaatacgtactgcaggcggac
ggcagtcacgagcagcgctgccgtgtggtggatacgacggtgggccgcgcgctgctgtcg
gaaattctgcccaagggcctgtccttcgacgcggtcaaccgcgacatgaccaagaaggcg
atctccgccgccatcaacctgtgttaccgcagcgtcggtctgaaggagaccgtcgtcttc
gccgatcagctcatgtacacgggatttgcttatgccacgcgcgccggcgtgtcgatcggt
gtggacgacatggtcgttccgcagcagaaaggcaagatcctgagcggcgcggaacgcgaa
gtgaaggagatccaggagcagtacgcttccggcctggtcaccaacggcgaacgctacaac
aaggttgtcgatatctggtcacgaaccaatgatcaggtggccaaggcgatgatggacaag
ctcggcgtggaggaatcgctcgacgccaaagggcagaccgtcgtccagaagtccttcaac
tcgatctatatgatggccgattcaggcgcccgaggttcggcggcgcagattcgccagctt
gccggcatgcgcggcctgatggccaaaccggacggatccatcatcgaaacgccgatcacg
gccaacttccgtgaaggcctgaacgcgatgcagtacttcatctccacccacggcgcgcgc
aagggtctggccgataccgccctgaagaccgcgaactccggctatttgacgcgtcgcctg
gtcgatgtggcgcaggatctggtggcgaccgagctggattgcggtacgaccaacgggctg
atgatgactcccatcgtcgagggcggcgatgtcgtcgaggggctcggggagcgcgtgctg
ggtcgggtcgctgccgaggacgtctaccggccgagcggtgatgcggttgtcatcgaagcc
ggcaccctgatcgatgaaaaactcgtgaaggtgctcgagcacgaaggcgtggaccaggtg
aaggtgcgttcgccgatcagctgtgagacgcgctacggcgtctgcgcccagtgttacgga
cgcgatctggcccgcggtcatcgcatcaacctcggcgaggcggtcggcgtgatcgccgcc
cagtcgatcggcgagccgggtacgcagctgaccatgcgcaccttccatatcggcggtgcc
gcctcgcgcgcggccgcggccaactcggtcgaagcgaagggcaagggcgccgcgcgtctg
cacaatatcaagacggtgcatcatgaaaaggggcactgggtagccatctcccgctcgggc
gaactcggcatcatcgacgagttcggccgcgagcgtgagcgctacaagattccgtacggc
gcaaccattatggtggccgacggcgatccgatcgagtccggacagattctcgccacctgg
gatccgcacactcacccggtcgtcaccgaagtggcgggcttcatcaagttccaggacttc
gtcgacggcgtgacggcccagagccaggtggacgaagtgaccggcctgagcagcacggtc
gtgaccgatcccaagcagcgcagttccagcggcaaggacttgcgtccggtcgtgaagctg
gtgaatgccaagggcaaggaagtgaccttcgcgaataccgacatcccggcggtctatgcg
ctgcccagcggggccatcgtcaacctcgaggatggcgccaaggtgtcggtgggcgacgtc
attgcccgtatcccgcaggaatcttccaagacccgtgacatcaccggcggtctgcctcgc
gtcgcggatctgttcgaagcgcgcaagccgaaggactcggccattctggccgagtacacc
ggcacggtgagcttcggtaaggaaaccaagggtaagcggcgcctgatcatcacggatgaa
caaggcgagaaacacgaggagctgattccgaaatggcgccgcttgaacgtgttcgaaggt
gaaatgatcgagcgcggtgaagtgattgccgacggcgaacccaatccgcacgacatcctg
cgtctgcagggggtctcctcgctggcgaactacctggttcgggagatccaggatgtctat
cgcctgcagggcgtgaaaatcaacgacaagcacatcgaggtgatcattcgccagatgctt
cgcaaggtcgagatcgcacatgccggcgatacgaatctgctgcgcggcgagcagttggac
cgtgcccgcgtcaccgatatcaacgagcgcgccctggaggaaggcaagatcgaggcgcgc
atcgagccggtgctgctgggtatcaccaaggcgtcgctggcgaccgagtcgttcatttcc
gccgcctccttccaggagaccacccgcgtgctgaccgaagcggcggtgcgcggcctgaag
gacgatctgcgcggtttgaaggagaacgtcattgtcggccggcttatcccggcgggtacg
ggctcgttctatcatcagcggcgcaggcgtgaggccgccggttccgccgccggcttcatg
gatgtcggcgccacggctaccgataccgaggaaccggtagcggacgaggcgggggccacg
gcggagtga
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