Steroidobacter denitrificans: ACG33_05385
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Entry
ACG33_05385 CDS
T04296
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sdf
Steroidobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
sdf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdf01002
]
ACG33_05385
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdf01011
]
ACG33_05385
Peptidases and inhibitors [BR:
sdf01002
]
Cysteine peptidases
Family C82
ACG33_05385
Peptidoglycan biosynthesis and degradation proteins [BR:
sdf01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ACG33_05385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
DUF6208
Motif
Other DBs
NCBI-ProteinID:
AMN46538
UniProt:
A0A127FAB1
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Position
1212984..1214645
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AA seq
553 aa
AA seq
DB search
MELSGLDETRGSQARIAWAAWIRDFYAQRAFQPAWTNPHTSFELLRSIQESELDGLDPGD
YHLAPLQHLQAALSSSGAADPARIDLLRAQYDVLQTDALLRLGYHLSFGKVDPESFDAQW
NYGRMLPRPDTARRIEAALAADDIHARIEALKPTHRLYAALKAELRRYRLLAAADVSGMS
SAALLSAGKTLRPGDVDPRVLQLRERLRIHGDLDAGLNADARPDETFRARERQDETADEA
SDDALAGAAYDARLEAAVRRFQARMGLVVDAAVGTRTREELNVSVAERILQLRINLDRGR
ILLQELPSQFVVVNIAGYMIYMVRDDEVIWRSRVQVGRTYRRTPIFRSAISYLVWNPSWT
VPPGIIRSDILPGARRDPRSITRRGLTVLDREGKVIDPETIDWSSFRSGHIPYTLRQEPG
PDNAMGRVKFMFPNNYDVYLHDTPSKSLFEASDRTFSSGCVRVERPLELALLLLNDPEWN
AEAIAHTLESRRLLNVTLRDKMPVLLTYWTAWAGAQGEINFRRDVYGQDAQWAAGLDAPF
NIRRRPLVETSRP
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
ctggagttgagcggcctcgacgagaccaggggctctcaggcacgcatcgcctgggcggct
tggatccgcgatttttatgcgcaacgcgccttccagcccgcctggacgaatccgcatact
tcgttcgaattgctgcgctccatccaggaaagcgaattggatgggctggaccccggcgac
tatcatctggcgccgctccagcatctgcaggccgcgctgagttcctccggcgcagccgat
cctgccaggatcgacctgttgcgggcacaatatgatgtgctgcagacggatgccctgctg
cgcctgggataccatttgtcgttcggcaaggtggatccggagtccttcgatgcccaatgg
aactatgggcgcatgctgccgaggccggataccgcgaggcggatcgaagctgcattggcg
gcggacgatattcatgcccgcatcgaggcgttgaaacccacccatcggttgtatgcggcc
ttgaaggccgaattgcgtcggtatcggctgctggccgcggccgatgtctccggcatgtcg
tccgcggcgctgctgtccgcgggcaagacactcaggcccggggatgtcgatccgcgtgtc
ttgcagctgcgcgagcgactgcgaatccacggtgatctggatgctggtctgaatgcggat
gcacgcccggatgagacgttccgagcccgggaacggcaggatgaaacggcggatgaagcc
tcggatgatgccctggccggggcggcgtacgacgcacggctcgaagcagcagtgcgtcgt
tttcaggcgcgcatggggttggtcgtcgatgccgccgtcggcacgcgcacccgcgaggaa
ctcaacgtgtcggtcgcggagcggatcttgcagttacgcatcaacctggaccgtggacgc
atcctgttgcaggagcttccgtcgcagttcgtcgttgtcaatatcgccggctacatgatc
tacatggttcgcgatgatgaagtcatctggcgttcgcgagtgcaggtcggtcggacctac
cgtcgtacaccgatctttcgctccgccatcagctatctggtgtggaatccatcctggacg
gttccaccgggaatcatccggagcgacattctccccggcgcgcgccgtgatccacgctcg
atcacacgacgcggcttgacggtactggatcgcgagggaaaggtcatcgatcctgaaacg
atcgactggtcgagctttcgcagcggacatattccgtacacgctgcgccaggaacccggg
cccgataacgccatgggccgcgtgaaattcatgtttcccaataactacgacgtctatttg
cacgatacgccttcgaagtccttgttcgaggcatcggatcgaaccttcagttcgggctgt
gtgcgggtggaacggccgctggagctggcactgttgctgttgaacgatcccgagtggaat
gctgaggcgatcgcgcatacgcttgaatccaggcgtctgcttaatgtgacgctgcgggac
aagatgccggtgctgctgacgtattggaccgcctgggcgggcgcgcagggtgagatcaat
ttccggcgcgacgtgtacggccaggatgcgcaatgggcagcgggtctggatgctccattc
aatattcggcgccgcccgctggtcgagacttcacggccgtag
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