Steroidobacter denitrificans: ACG33_07205
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Entry
ACG33_07205 CDS
T04296
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sdf
Steroidobacter denitrificans
Pathway
sdf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACG33_07205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdf03400
]
ACG33_07205
DNA repair and recombination proteins [BR:
sdf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACG33_07205
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACG33_07205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
Ish1
Motif
Other DBs
NCBI-ProteinID:
AMN46887
UniProt:
A0A127F8Z5
LinkDB
All DBs
Position
1597382..1599418
Genome browser
AA seq
678 aa
AA seq
DB search
MTAPLADTAPRTSAFQLDGRYQPAGDQPQAIAQLVEGLRSGLAHQTLLGVTGSGKTFSIA
NVIQVLQRPTLVLAHNKTLAAQLYGEFKEFFPHNAVEYFVSYYDYYQPEAYVPSSDTYIE
KDSSVNEHIEQMRLSATKALLERSDAIIVATVSAIYGLGDPQSYLSMVLHLSRGDRLDQR
KILRRLADMQYTRNELDLSQGTYRVRGDVIDIFPAESEREALRVELFDDEVEALQLFDPL
TGEILRKVPRYTVFPSSHYVTPRERLIAAVDAIREELHERLQVLKSGGKLLEAQRLEQRT
RFDIEMIREVGYCNGIENYSRFLSGRSPGEPPPCLFDYLPADALLVVDESHQTIPQLGAM
YRGDRSRKETLVEYGFRLPSALDNRPLRFDEWESLAPQTIFVSATPGPYELERSGQIVEQ
LVRPTGLIDPSVEIRPVRTQVDDVLSEIRICVAHNERVLITTLTKRMAEDLTEYLDEHGV
KVRYLHADIDTVERMEIIRDLRLGRFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRS
ENSLIQTIGRAARHLNGRAILYADRRTGSIERALAETNRRRARQIEFNELHGITPRGITK
EVTDILEGAYAGAERGPVRRVAEPAHDYSTLTPAQVQRKIKKLEQEMMKRARNLEFEEAA
RLRDEVRELRQSSLGLNA
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
ttgacggcacctcttgcggatacggctccccgcacgtctgcatttcagctcgatgggcgc
tatcagcccgcgggcgatcaaccccaggctatcgcgcagctggtggaggggctgcgttcg
ggtctggcgcaccagaccttgctgggcgtgaccggcagcggcaagaccttttcgatcgct
aacgtcatccaggtactgcagcgtcccaccctggtgttggcgcacaacaagaccttggcg
gcccagctctacggcgagttcaaggagttcttcccgcacaacgcggtggagtacttcgtg
tcctactacgattactatcagcctgaggcctacgtgccttcctcggatacctatatcgag
aaagactcctcggtgaacgagcacatcgagcagatgcgcctatcggcaaccaaggcgctg
ctggaacgctctgacgccatcatcgtcgcgaccgtctcggcaatctatggtctgggcgac
ccacaatcctacctgtcgatggtgctgcatctgtcgcgcggggatcggctggatcaacgc
aagatcctgcgtcgattggcggacatgcagtacacgcgcaacgagctggatctcagtcag
ggcacctaccgcgtacgcggcgacgtgatcgacatctttccggcggaatccgagcgcgaa
gccttgcgtgtagagttgttcgacgatgaggtcgaggcgctgcaactgttcgatccgctc
acgggcgaaatcctgcgcaaggtaccgcgctataccgtgttcccctcgtcgcactatgtc
actccgcgcgaacgtctgatcgcggcggtggacgcaatccgcgaggagctgcatgagcgc
ctgcaggtcctgaagagcggcggcaagctgctggaggcgcagcgcctggagcagcgtacg
cgcttcgatatcgaaatgattcgggaagtcggttattgcaacgggatcgagaactactcg
cgcttcctgtccggtcgcagtccaggcgagccgccgccctgcctgttcgactatctgcct
gccgacgcactgctggtcgtcgacgagagccatcagacgattccgcagctaggcgcgatg
tatcgcggcgatcgctcgcgcaaggaaaccttggtcgagtacggctttcggttgccttcc
gcgctggacaaccggccgctacgcttcgatgagtgggagtcgctggcgccgcagacgatt
ttcgtctcggcgacgccaggaccctatgaactggagcgttcggggcagatcgtggagcag
ctggtgcgtccgaccggcctgatcgatccttcggtcgaaatacgtcccgtgcgcacccag
gtcgatgatgtgctctcggagatccgaatttgcgttgcgcacaatgaacgagtgctcatc
acgaccctgaccaaacggatggcggaggaccttaccgaatacctggacgaacatggcgtc
aaggtgcgctacctgcatgccgatatcgataccgtagagcgcatggagatcatccgggat
ctgcgcctgggaaggttcgatgtgctggtgggcatcaacttgttgcgcgaaggcctggac
atgcccgaggtatcgctggtggcgatcctggatgccgacaaggagggctttctgcgatcg
gaaaactcgctgatccagacgatcggtcgagccgcacggcatctcaatggacgggcgatt
ctgtatgcggatcgccgtaccggttcgatcgagcgtgcgttagccgaaaccaaccggcgt
cgcgcgcgtcagatcgagttcaatgagttgcacggtatcactccacgcggcatcaccaag
gaggttacggatattctggaaggtgcatacgccggtgcagagcgcggacccgtccgtcgg
gtcgccgagcctgctcatgattattccacgctgacgccggcgcaggtacagcgcaagatc
aagaagctcgagcaggagatgatgaagcgtgcgcgcaatctggaattcgaagaagccgcc
aggcttcgtgatgaagtgcgcgaactgcgccagtcgtctcttgggttgaatgcatag
DBGET
integrated database retrieval system
