Steroidobacter denitrificans: ACG33_09020
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Entry
ACG33_09020 CDS
T04296
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sdf
Steroidobacter denitrificans
Pathway
sdf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ACG33_09020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdf03019
]
ACG33_09020
03009 Ribosome biogenesis [BR:
sdf03009
]
ACG33_09020
Messenger RNA biogenesis [BR:
sdf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACG33_09020
Ribosome biogenesis [BR:
sdf03009
]
Eukaryotic type
Pre-60S particles
RNases
ACG33_09020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AMN47233
UniProt:
A0A127F9Y7
LinkDB
All DBs
Position
complement(1967444..1968025)
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AA seq
193 aa
AA seq
DB search
MLQRRYTGSATVIDRDPTRLIWIDLEMTGLNTDTDHIIEIATIVTDKHLETLQEGPVLAI
HQSDAVLDGMDDWNRNQHGGSGLAARVRASTITVQEAERQTLAFLSRWVDAGVSPMCGNS
VCQDRRFMAREMPTLERYFHYRNLDVSTLKELVRRWAPDIYSGFRKNATHLALDDIRDSI
RELAYYRATFLRV
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaacgacggtatacaggcagcgcaacagtgatcgaccgagacccgacccgcctc
atctggatcgatttggagatgacgggtctgaataccgacaccgaccatatcatcgagatc
gccacgatcgtgaccgacaagcacctggagacgctgcaggaggggccggtgctggcgatc
caccaaagcgatgcggtgctggatggcatggacgactggaaccgcaatcagcatggcggt
tcagggctggccgcgcgcgtgcgcgccagtacgatcaccgtgcaggaagccgagcgccag
actctggccttcctgagccggtgggtcgacgcgggcgtctcgccgatgtgcggcaacagc
gtctgccaggaccggcggttcatggcgcgcgagatgccgacactggaacgctatttccat
tatcgcaatctcgatgtaagcaccctgaaggaactggtgcgccgctgggcgcccgatatc
tacagcggtttccgaaaaaacgcgacccatctcgcgctggacgatatccgcgactcgatc
cgggaactggcgtactatcgggcgacctttctgcgggtgtaa
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