Steroidobacter denitrificans: ACG33_15370
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Entry
ACG33_15370 CDS
T04296
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sdf
Steroidobacter denitrificans
Pathway
sdf03420
Nucleotide excision repair
sdf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACG33_15370 (uvrD)
03430 Mismatch repair
ACG33_15370 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdf03400
]
ACG33_15370 (uvrD)
Enzymes [BR:
sdf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACG33_15370 (uvrD)
DNA repair and recombination proteins [BR:
sdf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACG33_15370 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACG33_15370 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMN48452
UniProt:
A0A127FDL5
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All DBs
Position
3425394..3427580
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AA seq
728 aa
AA seq
DB search
MDISPLLSGLNDAQRAAVAAPLAPTLVLAGAGSGKTRVLTHRVAWLVQVEQVSAHSILAV
TFTNKAAGEMRSRIESMLHVPSAPLWIGTFHGIAHRLLRLHWRETNLPQAFQIMDADDQL
RAIRKLLKARNMDEARWAPKEVMWFINARKDEGQRAGQLKDEGDPTRREFIRLYAAYQEQ
CDRSGIVDFAELLLRVYELLRNNPDMRAHYRRRFRHVLIDEFQDTNTIQYAWLKLLTSPD
PETSPGGLPFAVGDDDQSIYRWRGARVENLHQFQRDYPGVQLFRLEQNYRSTGNILSAAN
ALIANNSGRLGKNLWTSGEQGEPVRLYTAFNERDEADFVINQLRDWIDKGGRRDECAILY
RSNAQSRTFEEALLSARIPYRVYGGLRFFERAEIKDALAYLRLIFHRADDASFERIVNLP
TRGIGLKTLDTVRDYARANTCSMWEAAGACIAELGARAGSCLHAFLALIDLLDQQIRALP
LFEQVDHVIHASGLLAHYRQERGDRGEARVENLNELVTAARNYEPDTEDAMPPLASFLAH
AVLESGEQQADAWEDSVQMMSLHSAKGLEFPLVFLTGLEDGLFPHLRSLSDAEGLEEERR
LCYVGTTRAMRQLYLTYAEQRRLHGQDNYAAPSRFIREIPPEFIEEVRPRIQISRPVYMP
RGKAPAALREDTSAMGIQLGQRVRHGKFGEGVVVDIEGQGNHARVQVNFEQHGSAKWLML
TYANLEPV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggatatctccccgcttctttccggcctgaacgacgcgcagcgcgcagcggtcgcggcg
cccctggcccccacgctcgtgctggcaggtgccggcagcggcaaaacacgcgtactgacc
catcgggttgcctggctggtgcaggtcgaacaggtctcggcgcacagcatcctggccgtg
acgttcacgaacaaggccgccggggaaatgcgtagccgtatcgaatccatgctccacgtt
ccaagcgctcccttgtggatcggcacatttcacggtattgcgcatcggctcctgcgactg
cactggcgcgaaacaaatctgccgcaggccttccagatcatggacgccgacgaccaacta
cgcgccatccgcaagctgttgaaggcacgcaatatggacgaggcgcgctgggcacccaag
gaagtgatgtggttcatcaatgcgcgcaaagacgagggccagcgagccggtcagctcaag
gacgagggcgaccccacacggcgcgagttcattcgcctatatgcagcctatcaggaacag
tgcgatcgcagcggcatcgtcgacttcgccgaactgttgctgcgcgtctacgagctgctg
cgcaacaatccggatatgcgggcgcactatcgccggcgttttcgccatgtgctgatcgac
gagtttcaggacaccaatacgatccagtatgcctggttgaagctgctcaccagcccggat
ccggaaacttcgccgggtgggctaccgttcgcggtgggcgacgatgaccagtcgatctat
cgctggcgcggcgcgcgcgtcgagaatctgcaccagttccagcgtgactatccaggcgta
cagttgtttcgcttggaacagaattaccgctccaccggcaatattctatcggcggcgaac
gccttgatcgccaacaatagcgggcggctgggcaagaatctctggaccagcggcgaacag
ggagaacccgtcaggttgtacaccgccttcaacgaacgcgatgaagccgatttcgtgatc
aatcagctgcgcgattggatcgacaaaggcggccggcgcgacgagtgcgccattctttat
cgatcgaacgctcagtcccgcaccttcgaagaagcactgctgtccgcccgtattccatat
cgggtatatggaggactgagattcttcgaacgcgccgagatcaaggatgcgctggcatat
ctgcgtctgatcttccatcgcgccgacgatgcttccttcgagcgtatcgtaaacctgccg
acccgcggcatcggtttgaagacgctcgataccgtccgcgattatgcgcgcgccaatacc
tgctcgatgtgggaagccgccggcgcatgtattgcggaactcggcgcacgggcgggctcc
tgcctacacgccttcctggcattgatcgacctgctcgatcagcagatcagggcattgccg
ctgttcgagcaggtcgatcatgtcattcatgccagcggcctgcttgcgcactatcgccag
gagaggggcgatcggggcgaggcccgcgtggaaaacctgaacgaactggtcaccgcggcg
cgcaactacgagccggacacagaggacgcgatgcccccattggccagcttcctggcgcat
gccgtgctggagtccggcgaacagcaggccgacgcctgggaagacagcgtacagatgatg
agcctgcactccgcaaaaggcctggaatttccgctggtcttcctgaccggcctggaagac
ggcctgtttcctcacctgcgatcgctcagcgacgcggaaggactggaggaagaacgccgc
ctgtgttacgtcggcacgacacgtgccatgcgccaactgtatctgacctatgcggaacag
cgccgtctgcatggccaggacaactatgccgcaccctcgcgcttcatccgggagattccg
cctgaattcatcgaggaagttcgtccgcgcatccagatctcccgcccggtctacatgccg
cgcggcaaggcccctgcagcattgcgcgaagatacctcggccatgggtatccaattgggc
cagcgagtcagacacggaaaattcggcgagggagtcgtggtggacatcgagggccagggc
aaccatgcgcgtgtgcaggtcaacttcgagcagcatggttcggcgaaatggttgatgctg
acctatgcgaacctggaaccggtatga
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