Streptococcus dysgalactiae subsp. equisimilis ATCC 12394: SDE12394_06030
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Entry
SDE12394_06030 CDS
T02017
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sdg
Streptococcus dysgalactiae subsp. equisimilis ATCC 12394
Pathway
sdg03420
Nucleotide excision repair
sdg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SDE12394_06030
03430 Mismatch repair
SDE12394_06030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdg03400
]
SDE12394_06030
Enzymes [BR:
sdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SDE12394_06030
DNA repair and recombination proteins [BR:
sdg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SDE12394_06030
MMR (mismatch excision repair)
Other MMR factors
SDE12394_06030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Pox_VLTF3
Motif
Other DBs
NCBI-ProteinID:
ADX24678
LinkDB
All DBs
Position
complement(1158227..1160545)
Genome browser
AA seq
772 aa
AA seq
DB search
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITF
TNKAAREMKERALALNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLM
KRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELR
RSEALDFDDLIMMTLRLFDSNPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRN
RRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMAQELGKNFKDFAVLYRTNAQSR
TIEEALLKSNIPYTMIGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPG
TLDKLRQFAYESNQSLLEAASNLFMSPLKGKAAQAMTDLAGILNQLRQDLETMSITDLAE
ALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLND
LALIADTDDSQTEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERR
LAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLNEISEELLSYQGLARPAQSSFGVR
FSTDKHTQFGQGMSLSEALQARKAQAQVRQSPQPTQARTISSASTTSGLPFGSNRSLEEV
TWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttattaaatggaatgaatgatcggcaggcacaagctgttcaaacaactgaa
ggccccttattgattatggcgggggctggttctggtaaaacaagggtactgacccatcgt
attgcctatttaattgatgaaaaatttgtcaatccttggaatattttagctattaccttt
actaataaggctgcgcgtgaaatgaaagaaagggccttggccttaaatccagctactaaa
gataccttaattgctacctttcactccatgtgtgtacggattctgcgtcgtgaggctgat
cacattggttacaaccgaaacttcacaatcgtggatccaggtgagcaacgaacgttgatg
aagcgcattttaaaacaattaaatatagaccctaaaaagtggaatgaacgttctatttta
ggaactatttcaaacgctaaaaatgatttgcttgatgagaagggatacgaggcgcaggct
gctgatatgtatagtcaaatagtagcgagatgttacaaagcttatcaggaagaattacgt
cgtagtgaagcattggactttgatgatttaatcatgatgactctacgcctttttgatagt
aatcctgacgtattagcttattaccagcagcgctaccaatacattcacgtggacgagtat
caagataccaaccatgcccaatatcaattagtcaagttgctagcctctcgctttaaaaac
atttgcgttgttggagatgctgatcagtctatctatggttggcggggagctgacatgcaa
aatattcttgattttgaaaaagattacccagatgctaaggtagtgcttttagaagaaaac
tatcgctctaccaagaaaattctgcaagcagctaacgacgtgattaacaataaccgtaat
cgccgtcctaagaaactttggacacaaaatgcagacggggaacaactggtttattatagg
gcaaatgatgagcgagatgaggcagtatttgtcgcttctaccattagcaacatggctcaa
gaactcgggaaaaatttcaaagatttcgctgttttatatcgtaccaatgcccaatcccgt
acgattgaagaagcgctcttaaaatccaacattccttacaccatgattggcggaactaag
ttctatagccgtaaagaaattcgcgacttaattgcctacttaacgattgtcgctaaccca
gctgataatatttcctttgagcggattgtgaatgaacctaaacgaggtgttggtccagga
acgcttgataaactgcgtcagtttgcttatgaaagcaatcaatctttattagaagctgct
tcaaacctcttcatgtcacctttaaaaggaaaagctgcgcaggccatgacggatttggca
ggcatcttaaatcaattacgacaagatttagagaccatgagtatcactgacttagcagaa
gctttgttagaaaaaacaggctatttagatagcttacgcctgcaaaatactttggaaagt
caggctcgcattgagaatatcgaagagttcttatctgttaccaaaaattttgacgagtca
agtgcctctcaagaagaagacgaaaccggtgttgatcgcttgggacgttttttaaatgat
ttagcactgattgctgatacagatgattcccaaacagaagctgctgaagtaaccttaatg
accctacatgctgccaaaggtttggagttccctgttgttttcttaattggtatggaagaa
ggtgtcttccccttatcacgggcttcggaagatcctgatgaattagaggaagaaagacgc
ttggcctatgtggggataacaagggcagaagaagttctctttatgactaatgcaaatacc
agaactctctttggtaaaagtagttataaccgtccaacacggttcttaaacgaaatttca
gaagaattactctcttatcaaggattggcaagaccagcacaatcttcatttggcgtgcgt
ttctctactgacaaacacacacagtttggacaggggatgagtctatcagaagccctgcaa
gctcgaaaggctcaggctcaagtaagacaatcaccacagccaacgcaggcgcgtacgata
tcatcagcttcaactacctcaggtttaccgtttggttctaatcgctctttagaagaggtc
acttggcagataggcgatatcgctcatcataaaaaatggggagatgggactgtgctggag
gtttcaggatctggaaaaacgatggaattgaaaatcaaattcccagaagttgggttaaag
aaattactagcaagtgttgctcctattgagaaaaaataa
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