Streptococcus dysgalactiae subsp. equisimilis ATCC 12394: SDE12394_08615
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Entry
SDE12394_08615 CDS
T02017
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sdg
Streptococcus dysgalactiae subsp. equisimilis ATCC 12394
Brite
KEGG Orthology (KO) [BR:
sdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdg03019
]
SDE12394_08615
03009 Ribosome biogenesis [BR:
sdg03009
]
SDE12394_08615
Enzymes [BR:
sdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SDE12394_08615
Messenger RNA biogenesis [BR:
sdg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SDE12394_08615
Ribosome biogenesis [BR:
sdg03009
]
Prokaryotic type
rRNA helicases
SDE12394_08615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
TerL_ATPase
SWI2_SNF2
Helicase_RecD
Flavoprotein
Motif
Other DBs
NCBI-ProteinID:
ADX25163
LinkDB
All DBs
Position
complement(1694518..1695861)
Genome browser
AA seq
447 aa
AA seq
DB search
MSFKDYHFKQYIQQALEEIGFVNPTEVQQRLIPIVNSGRDLVGESKTGSGKTHTFLLPIF
EKLDEAKAEVQVVVTAPSRELATQIFDACKQIAKHSPKDIRLANYVGGTDKLRQIEKLKS
GQPHIVIGTPGRIYDLVKSGDLAIHKATTFVVDEADMTMDMGFLDTVDKIAASLPKSVQI
LVFSATIPQKLQPFLKKYLTNPVIEQIKTETVIADTIDNWLVSTKGRDKNGQILEILKTM
QPYMAMLFVNTKERADDLHAFLVANGLKVAKIHGGIPPRERKRIMNQVKKLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGMAGTAITLYQPSDDSDIKELEKM
GIVFTPKMLKNGEFQDTYDRDRRQNREKSYQKLDTEMIGLVKKKKKKVKPGYKKKIQWAV
DEKRRKERRAENRAKGRAERKAKKQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagattatcattttaagcaatacatccagcaagcactggaggaaattggc
tttgtcaatccaacagaggtccagcaacgcttgattcctattgtcaactccggccgtgac
ttagttggggaatcaaaaacaggttcagggaaaacccacacctttttgttgcccattttt
gaaaaacttgatgaagctaaagcagaagtgcaagttgttgttacagctcctagccgtgaa
ttagctactcaaatttttgatgcctgtaaacaaattgctaagcattctcccaaagatatc
cgtttggctaactatgtgggaggtacggataaattacgccaaattgaaaagttaaaaagc
ggccagccacacattgtcattggaactccgggtcgtatttatgatttggttaaatctggt
gacttagcgattcataaggccacgactttcgttgtggatgaggctgacatgaccatggac
atgggctttttggatacggttgataagattgcagcttctcttccaaagtctgttcagatt
ttggtgttctcagcaaccattccacagaaattacagccctttttgaaaaaatacttgacc
aatcctgttattgaacaaatcaaaacagagacagttattgctgatacgattgataactgg
cttgtgtcgacaaaaggcagggataaaaatgggcaaattttagagattcttaaaacgatg
cagccctatatggcaatgctttttgtcaatactaaagagcgcgcagatgacttgcatgcc
tttttagtggccaatggtttgaaggtagccaagattcatggtggcattcctccaagagaa
cgtaagcgtatcatgaaccaagttaaaaagttggactttgaatacattgttgctactgac
ttggcagcgcgcggaattgacattgaaggggtcagccatgtcatcaatgatgctattcca
caagatttatctttctttgtccatcgtgtaggccggacaggtcgaaatggtatggcagga
actgctattaccctttatcaaccaagtgatgactcagatatcaaagagttggaaaaaatg
ggaattgtctttacaccgaagatgctcaaaaatggagaatttcaagatacctatgaccga
gatcgtcgtcaaaaccgtgagaaatcttatcaaaaattagacacggaaatgattggtttg
gtgaagaagaaaaagaaaaaagtcaaaccaggttataagaaaaaaattcagtgggcggtt
gatgaaaaacgtcgcaaagaacgtcgcgctgaaaaccgtgccaaaggccgtgccgagcgt
aaggctaaaaaacaaagtttttaa
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